Factsheet for Zm00001d022151_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90263	Sorghum	cytosol, mitochondrion, plastid	87.71	88.35
Zm00001d006874_P001	Maize	cytosol	80.96	82.96
Os07t0617700-01	Rice	cytosol	65.54	67.0
TraesCS2D01G175100.1	Wheat	cytosol	66.75	66.43
TraesCS2A01G167400.1	Wheat	cytosol	66.51	66.19
TraesCS2B01G193700.1	Wheat	cytosol	65.3	65.3
Zm00001d029442_P001	Maize	cytosol, nucleus, plastid	61.45	63.59
HORVU2Hr1G030810.1	Barley	plastid	66.02	50.18
GSMUA_Achr7P11470_001	Banana	nucleus	38.31	45.17
KRH15707	Soybean	cytosol	43.86	44.72
VIT_04s0008g03190.t01	Wine grape	cytosol	43.61	44.47
KRH05328	Soybean	cytosol	43.61	44.47
GSMUA_Achr10P...	Banana	cytosol	42.41	42.82
KRH61620	Soybean	cytosol	41.69	41.89
CDY71979	Canola	cytosol	39.52	41.62
CDX72391	Canola	cytosol	39.52	41.52
KRH52288	Soybean	cytosol	41.2	41.4
Bra037018.1-P	Field mustard	cytosol	39.04	41.22
CDX75335	Canola	nucleus	38.8	39.46
Bra011423.1-P	Field mustard	nucleus	38.55	39.22
CDX68951	Canola	cytosol	38.55	38.93
PGSC0003DMT400019032	Potato	nucleus	39.04	38.76
Solyc08g067300.1.1	Tomato	nucleus	38.31	38.41
AT4G33160.2	Thale cress	cytosol	38.8	31.08
Zm00001d053358_P001	Maize	cytosol	19.04	19.51
Zm00001d043989_P001	Maize	cytosol	18.8	19.4
Zm00001d011994_P001	Maize	cytosol	20.0	18.74
Zm00001d016066_P001	Maize	cytosol	18.55	18.55
Zm00001d026557_P001	Maize	cytosol, mitochondrion, plastid	18.07	17.86
Zm00001d026558_P001	Maize	cytosol, mitochondrion, plastid	18.07	17.86
Zm00001d042309_P001	Maize	cytosol	20.24	17.8
Zm00001d036653_P001	Maize	plastid	17.83	16.97
Zm00001d046950_P001	Maize	cytosol, mitochondrion, plastid	17.35	16.63

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:103633424	Gene3D:2.120.10.80	MapMan:35.1	ProteinID:AAV64198.1	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	ProteinID:ONM59666.1	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR45094
PANTHER:PTHR45094:SF1	UniProt:Q5GAU2	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI00004C97B8
EnsemblPlantsGene:Zm00001d022151	EnsemblPlants:Zm00001d022151_P001	EnsemblPlants:Zm00001d022151_T001	SEG:seg	:	:

Description

F-box protein

Coordinates

chr7:+:171318378..171319625

Molecular Weight (calculated)

43846.8 Da

IEP (calculated)

7.359

GRAVY (calculated)

-0.078

Length

415 amino acids

Sequence
(BLAST)

001: MAATLDGAAG CRKRKRAAPG LADLHDDMLE RVLARLPPAS YFRLRGVSRR WRAAAESRSF RAACARVTAR DPWFLMLEDS DHQDQDQDER RPRPAAVFDS
101: AERALARWRG APVPLQPVAA ASGLVLYRDP STGGLTVVNP LTGASRALPP PARVAGALQA VAMYGSPYRV VLILGELPEL STVAYDSSTN AWSEQAALSR
201: KPEVEGAPSR ERVAEVGDGD GDDTVYFLSK SGDVVASTMQ RSASRQYSSA VACGGCGGGD AVAYFLSRSG TVVACDLARR AFAELPRILP AYHEHSIDVV
301: ACGGAAYAVV LSEFLDAASL RVWEFAGGAW RQVAAMPPAM AHGFRGAKAD VNCVGHGGRL MVCVSSSSAG AGGCFLCDVG TNRWEELPRR AAGDGDATTG
401: FVSALSFEPR IEAAV

Best Arabidopsis Sequence Match ( AT4G33160.1 )
(BLAST)

001: MPSSATSTYL LSLKQVSLTA SSPLLLQLKD RFFHQPKLLN MGFSTGKRKS RDEEEDRVSF FASEFPMDDL NDDVLERVLS WLPTSCFFRM SSVCKRWKSS
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV

Arabidopsis Description

F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.