Factsheet for GSMUA_Achr3P03450_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	81.67	79.74
GSMUA_Achr6P14190_001	Banana	cytosol	79.51	77.63
GSMUA_Achr7P10710_001	Banana	cytosol	74.93	74.13
KXG29968	Sorghum	cytosol	73.32	66.67
Zm00001d053358_P001	Maize	cytosol	71.7	65.68
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	70.35	63.97
Zm00001d016066_P001	Maize	cytosol	70.35	62.89
GSMUA_Achr9P05330_001	Banana	cytosol	64.15	59.2
KRH47995	Soybean	cytosol	40.7	56.13
Solyc01g095370.2.1	Tomato	cytosol	60.65	55.69
PGSC0003DMT400000251	Potato	cytosol	60.65	55.56
KRH68853	Soybean	cytosol	59.03	54.34
Bra007616.1-P	Field mustard	cytosol	58.49	53.71
VIT_02s0025g00830.t01	Wine grape	cytosol	58.76	53.69
KRG97101	Soybean	cytosol	58.22	53.33
VIT_15s0046g01540.t01	Wine grape	cytosol	59.3	53.27
Bra003458.1-P	Field mustard	nucleus	58.22	52.94
CDY52009	Canola	nucleus	57.95	52.83
CDX89124	Canola	cytosol	58.22	52.81
CDY53910	Canola	cytosol	57.95	52.7
CDY43939	Canola	cytosol	57.68	51.32
Bra014429.1-P	Field mustard	cytosol	58.22	51.31
CDX71729	Canola	mitochondrion	58.76	49.1
AT3G61590.4	Thale cress	plasma membrane	58.76	48.77
CDY11364	Canola	cytosol, golgi, nucleus	58.22	47.47
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	61.46	42.38
GSMUA_Achr1P09520_001	Banana	cytosol	23.72	25.21
GSMUA_AchrUn_...	Banana	cytosol	20.22	19.48
GSMUA_Achr10P...	Banana	cytosol	18.87	17.03
GSMUA_Achr7P11470_001	Banana	nucleus	15.63	16.48
GSMUA_Achr3P23630_001	Banana	plastid	15.63	15.18

Protein Annotations

EnsemblPlants:GSMUA_Achr3P03450_001	EnsemblPlants:GSMUA_Achr3T03450_001	EnsemblPlantsGene:GSMUA_Achr3G03450_001	InterPro:Gal_Oxase/kelch_b-propeller	PANTHER:PTHR10706	PANTHER:PTHR10706:SF140
SUPFAM:SSF50965	UniParc:UPI0002957F94	UniProt:M0SBG3	MapMan:19.2.2.8.1.4.6	:	:

Description

F-box/kelch-repeat protein At3g61590 [Source:GMGC_GENE;Acc:GSMUA_Achr3G03450_001]

Coordinates

chr3:+:2239754..2240968

Molecular Weight (calculated)

41851.9 Da

IEP (calculated)

6.765

GRAVY (calculated)

-0.230

Length

371 amino acids

Sequence
(BLAST)

001: MEGQTSWQFH PTSHHQSRVA EFEPIREDSD NHDQDALVSL DAILPDDLLE KMSPQKPWYF MFTCSDDAVS GYVYDPSLRK WYGFDFPCIE RSNWSVSASG
101: GLVCLMDGDN GSRIFVCNPI TRDRKRLRDA PGGKTPDYTA LAMSVDRSAH SYTVALAKCK QAPQDYCQWG LSIHVYESGT RSWATLFSEI LVGWRGGDEC
201: VICDGVLYYL IYSTGVLRNV EPRHCLAMYD LSARPSRTSL MQMAIPVPCS LTCGRLMNLK DRLVMVGGIG KHDRPGIIKG IGIWELHNRG WREVARMPQK
301: FFQGFGEFDD VFASGGADDL IYIQSFGSPA LLTFDVTQRV WRWSAKSPVS KRFPLQLFTG FCFEPRLAIA S

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.