Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G490900.1 | Wheat | nucleus | 86.81 | 89.27 |
| TraesCS3A01G453200.1 | Wheat | cytosol | 85.63 | 89.14 |
| Os01t0934000-01 | Rice | plasma membrane | 76.77 | 85.34 |
| EES04163 | Sorghum | cytosol | 74.41 | 82.89 |
| GSMUA_Achr11P... | Banana | cytosol | 47.83 | 81.0 |
| Zm00001d042215_P002 | Maize | cytosol, extracellular | 69.29 | 78.4 |
| Zm00001d011920_P003 | Maize | cytosol | 71.85 | 75.57 |
| KRG92887 | Soybean | cytosol | 50.59 | 68.17 |
| KRH33898 | Soybean | nucleus | 49.02 | 66.22 |
| VIT_14s0060g02380.t01 | Wine grape | plastid | 53.74 | 64.24 |
| Zm00001d010645_P001 | Maize | cytosol | 35.63 | 59.54 |
| PGSC0003DMT400063510 | Potato | nucleus | 51.77 | 59.23 |
| Zm00001d015812_P001 | Maize | cytosol | 19.29 | 57.31 |
| HORVU3Hr1G017150.1 | Barley | cytosol | 44.88 | 54.68 |
| HORVU3Hr1G017140.1 | Barley | extracellular, plasma membrane | 7.09 | 52.17 |
| Solyc01g099400.2.1 | Tomato | mitochondrion | 32.48 | 52.05 |
| GSMUA_Achr8P10070_001 | Banana | cytosol | 52.95 | 44.61 |
| HORVU6Hr1G084430.3 | Barley | cytosol | 19.88 | 22.65 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G098020.1 | EnsemblPlantsGene:HORVU3Hr1G098020 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | PANTHER:PTHR11227 | PANTHER:PTHR11227:SF33 | PFAM:PF00400 | SEG:seg |
| SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000B47D63C | UniProt:A0A287MG89 | MapMan:19.3.2.1.3 | : |
Description
No Description!
Coordinates
chrchr3H:-:657450243..657455985
Molecular Weight (calculated)
54951.8 Da
IEP (calculated)
5.609
GRAVY (calculated)
-0.413
Length
508 amino acids
Sequence
(BLAST)
(BLAST)
001: SPDSPLPIPR PCPPPLQSSP PLSSPMATPA LPNPSPLLDD APPPEPKQRR ETKVWKPKVR EPAAAAAQDP DAQDAEEPEP EQDEGPEPPP LLPTDAIEPT
101: PSGAEEDADA DDSSSVSSAP DASAGGKTER PFPAATDLLH ISYNQDYGCF AAGTKTGFRI YNCDPFREIF RRDLGPSPAA PDNDQALHQP PVAGVGGGGG
201: GIGVVEMLFR CNILALVGGG DAPHYPPNKV MIWDDHQSRC IGELSFKSPV RGVRLRRDRI VVVLENKIFV YNFADLKLVH QIETAPNPKG LCSVSQQPGS
301: IVLVCPGAQK GQIRVEHYGA RKTKFINAHA SRVACFALSQ DGRLIATAST KGTLVRIFNA AEGNLLQEVR RGADRAEIYS LAFSNNLQYL AVSSDKGTIH
401: VFNLKINVGL TTNDKPLPAP EADVPHMSPS FSFIKGVLPK YFHSEWSVAQ FRLHEGEQYI VAFGHEKNTV AVVGMDGSFY RCQFDPVNGG EMQQLECHNF
501: LKPSDQPQ
101: PSGAEEDADA DDSSSVSSAP DASAGGKTER PFPAATDLLH ISYNQDYGCF AAGTKTGFRI YNCDPFREIF RRDLGPSPAA PDNDQALHQP PVAGVGGGGG
201: GIGVVEMLFR CNILALVGGG DAPHYPPNKV MIWDDHQSRC IGELSFKSPV RGVRLRRDRI VVVLENKIFV YNFADLKLVH QIETAPNPKG LCSVSQQPGS
301: IVLVCPGAQK GQIRVEHYGA RKTKFINAHA SRVACFALSQ DGRLIATAST KGTLVRIFNA AEGNLLQEVR RGADRAEIYS LAFSNNLQYL AVSSDKGTIH
401: VFNLKINVGL TTNDKPLPAP EADVPHMSPS FSFIKGVLPK YFHSEWSVAQ FRLHEGEQYI VAFGHEKNTV AVVGMDGSFY RCQFDPVNGG EMQQLECHNF
501: LKPSDQPQ
001: MATVSSSSWP NPNPNPDSTS ASDSDSTFPS HRDRVDEPDS LDSFSSMSLN SDEPNQTSNQ SPLSPPTPNL PVMPPPSVLH LSFNQDHACF AVGTDRGFRI
101: LNCDPFREIF RRDFDRGGGV AVVEMLFRCN ILALVGGGPD PQYPPNKVMI WDDHQGRCIG ELSFRSDVRS VRLRRDRIIV VLEQKIFVYN FSDLKLMHQI
201: ETIANPKGLC AVSQGVGSMV LVCPGLQKGQ VRIEHYASKR TKFVMAHDSR IACFALTQDG HLLATASSKG TLVRIFNTVD GTLRQEVRRG ADRAEIYSLA
301: FSSNAQWLAV SSDKGTVHVF GLKVNSGSQV KDSSRIAPDA TPSSPSSSLS LFKGVLPRYF SSEWSVAQFR LVEGTQYIAA FGHQKNTVVI LGMDGSFYRC
401: QFDPVNGGEM SQLEYHNCLK PPSVF
101: LNCDPFREIF RRDFDRGGGV AVVEMLFRCN ILALVGGGPD PQYPPNKVMI WDDHQGRCIG ELSFRSDVRS VRLRRDRIIV VLEQKIFVYN FSDLKLMHQI
201: ETIANPKGLC AVSQGVGSMV LVCPGLQKGQ VRIEHYASKR TKFVMAHDSR IACFALTQDG HLLATASSKG TLVRIFNTVD GTLRQEVRRG ADRAEIYSLA
301: FSSNAQWLAV SSDKGTVHVF GLKVNSGSQV KDSSRIAPDA TPSSPSSSLS LFKGVLPRYF SSEWSVAQFR LVEGTQYIAA FGHQKNTVVI LGMDGSFYRC
401: QFDPVNGGEM SQLEYHNCLK PPSVF
Arabidopsis Description
ATG18AAutophagy-related protein 18a [Source:UniProtKB/Swiss-Prot;Acc:Q93VB2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.