Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr11P... | Banana | cytosol | 37.31 | 75.0 |
KRG92887 | Soybean | cytosol | 39.47 | 63.13 |
KRH33898 | Soybean | nucleus | 38.64 | 61.97 |
VIT_14s0060g02380.t01 | Wine grape | plastid | 43.62 | 61.88 |
Os01t0934000-01 | Rice | plasma membrane | 44.11 | 58.21 |
EES04163 | Sorghum | cytosol | 43.95 | 58.11 |
Zm00001d042215_P002 | Maize | cytosol, extracellular | 42.45 | 57.02 |
PGSC0003DMT400063510 | Potato | nucleus | 41.29 | 56.08 |
TraesCS3A01G453200.1 | Wheat | cytosol | 45.11 | 55.74 |
TraesCS3B01G490900.1 | Wheat | nucleus | 45.44 | 55.47 |
Zm00001d011920_P003 | Maize | cytosol | 43.95 | 54.87 |
Solyc01g099400.2.1 | Tomato | mitochondrion | 28.69 | 54.57 |
HORVU3Hr1G098020.1 | Barley | cytosol, plastid | 44.61 | 52.95 |
GSMUA_Achr10P... | Banana | cytosol, plastid | 32.67 | 47.13 |
Zm00001d015812_P001 | Maize | cytosol | 13.1 | 46.2 |
GSMUA_AchrUn_... | Banana | cytosol, plastid | 30.51 | 43.5 |
Zm00001d010645_P001 | Maize | cytosol | 20.4 | 40.46 |
GSMUA_Achr9P13430_001 | Banana | plastid | 12.94 | 21.2 |
Protein Annotations
MapMan:19.3.2.1.3 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr8G10070_001 | EnsemblPlants:GSMUA_Achr8P10070_001 | EnsemblPlants:GSMUA_Achr8T10070_001 | InterPro:IPR000008 | InterPro:IPR001680 |
InterPro:IPR035892 | UniProt:M0TP60 | PFAM:PF00168 | PFAM:PF00400 | PANTHER:PTHR11227 | PANTHER:PTHR11227:SF33 |
SMART:SM00320 | SUPFAM:SSF49562 | SUPFAM:SSF50978 | UniParc:UPI000295EEF8 | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf |
SEG:seg | : | : | : | : | : |
Description
Putative WD repeat domain phosphoinositide-interacting protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G10070_001]
Coordinates
chr8:+:7169182..7183354
Molecular Weight (calculated)
65330.0 Da
IEP (calculated)
6.000
GRAVY (calculated)
-0.260
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFRTMEITL ISAKDLKNVN VFSKMTVYAV VTISSDPRVW QRTTTDREGG RNPSWNSTHR LTVPNDVAHR HFLHILLRTE RALGDRDIGE VHGMTSGKPK
101: GVLNFSYSLS ERVLAPATAS APYPAYAAAP PPYPPQSGYQ QAPPYGYGYG YPPAGYGYGA APAPVVQPQR KNRLGMGLGA GLLGGALGGL LIGDMMSDAS
201: AYDAGYDAGF DDAGDFDPDS DSSFAPPLVE DSRPSPPRSI VPREEEEPVE PESCGEVAPS VDLPSAETSY SSHESALPAD LPPLLPVSSS SSPPKVEADS
301: VAPSLLHLSF NQDDGCFAAG TDRGFRIYNC DPFREIFRRD FDGGGVGVVE MLFRCNILAL VGGGTSPYYP PNKVMIWDDH QSRCIGELSF RSDQQGSLVL
401: VCPGGQKGQV RVEHYGARST KFIMAHDSRI ACFALSQDGR LIATASSKGT LIRIFSTVDG MLLQEVRRGA DRAEIYSLAF SANLQWLAVS SDKGTVHVFS
501: LKINLGSTAH DKPRPASDPN VPTTSSHLSF IKGVLPKYFN SEWSVAQFRL HENIQYIVAF GHQKNTVVIL GMDGSFFRCQ FDPVAGGEMT QLECYNFLKS
601: ETS
101: GVLNFSYSLS ERVLAPATAS APYPAYAAAP PPYPPQSGYQ QAPPYGYGYG YPPAGYGYGA APAPVVQPQR KNRLGMGLGA GLLGGALGGL LIGDMMSDAS
201: AYDAGYDAGF DDAGDFDPDS DSSFAPPLVE DSRPSPPRSI VPREEEEPVE PESCGEVAPS VDLPSAETSY SSHESALPAD LPPLLPVSSS SSPPKVEADS
301: VAPSLLHLSF NQDDGCFAAG TDRGFRIYNC DPFREIFRRD FDGGGVGVVE MLFRCNILAL VGGGTSPYYP PNKVMIWDDH QSRCIGELSF RSDQQGSLVL
401: VCPGGQKGQV RVEHYGARST KFIMAHDSRI ACFALSQDGR LIATASSKGT LIRIFSTVDG MLLQEVRRGA DRAEIYSLAF SANLQWLAVS SDKGTVHVFS
501: LKINLGSTAH DKPRPASDPN VPTTSSHLSF IKGVLPKYFN SEWSVAQFRL HENIQYIVAF GHQKNTVVIL GMDGSFFRCQ FDPVAGGEMT QLECYNFLKS
601: ETS
001: MATVSSSSWP NPNPNPDSTS ASDSDSTFPS HRDRVDEPDS LDSFSSMSLN SDEPNQTSNQ SPLSPPTPNL PVMPPPSVLH LSFNQDHACF AVGTDRGFRI
101: LNCDPFREIF RRDFDRGGGV AVVEMLFRCN ILALVGGGPD PQYPPNKVMI WDDHQGRCIG ELSFRSDVRS VRLRRDRIIV VLEQKIFVYN FSDLKLMHQI
201: ETIANPKGLC AVSQGVGSMV LVCPGLQKGQ VRIEHYASKR TKFVMAHDSR IACFALTQDG HLLATASSKG TLVRIFNTVD GTLRQEVRRG ADRAEIYSLA
301: FSSNAQWLAV SSDKGTVHVF GLKVNSGSQV KDSSRIAPDA TPSSPSSSLS LFKGVLPRYF SSEWSVAQFR LVEGTQYIAA FGHQKNTVVI LGMDGSFYRC
401: QFDPVNGGEM SQLEYHNCLK PPSVF
101: LNCDPFREIF RRDFDRGGGV AVVEMLFRCN ILALVGGGPD PQYPPNKVMI WDDHQGRCIG ELSFRSDVRS VRLRRDRIIV VLEQKIFVYN FSDLKLMHQI
201: ETIANPKGLC AVSQGVGSMV LVCPGLQKGQ VRIEHYASKR TKFVMAHDSR IACFALTQDG HLLATASSKG TLVRIFNTVD GTLRQEVRRG ADRAEIYSLA
301: FSSNAQWLAV SSDKGTVHVF GLKVNSGSQV KDSSRIAPDA TPSSPSSSLS LFKGVLPRYF SSEWSVAQFR LVEGTQYIAA FGHQKNTVVI LGMDGSFYRC
401: QFDPVNGGEM SQLEYHNCLK PPSVF
Arabidopsis Description
ATG18AAutophagy-related protein 18a [Source:UniProtKB/Swiss-Prot;Acc:Q93VB2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.