Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010645_P001 | Maize | cytosol | 81.87 | 46.05 |
| Zm00001d042215_P002 | Maize | cytosol, extracellular | 85.96 | 32.74 |
| EES04163 | Sorghum | cytosol | 76.02 | 28.51 |
| Zm00001d011920_P003 | Maize | cytosol | 72.51 | 25.67 |
| Os01t0934000-01 | Rice | plasma membrane | 67.25 | 25.16 |
| TraesCS3B01G490900.1 | Wheat | nucleus | 58.48 | 20.24 |
| TraesCS3A01G453200.1 | Wheat | cytosol | 57.31 | 20.08 |
| HORVU3Hr1G098020.1 | Barley | cytosol, plastid | 57.31 | 19.29 |
| VIT_14s0060g02380.t01 | Wine grape | plastid | 43.27 | 17.41 |
| PGSC0003DMT400063510 | Potato | nucleus | 41.52 | 15.99 |
| KRG92887 | Soybean | cytosol | 33.33 | 15.12 |
| KRH33898 | Soybean | nucleus | 32.16 | 14.63 |
| Zm00001d039703_P001 | Maize | cytosol | 32.75 | 13.43 |
| GSMUA_Achr8P10070_001 | Banana | cytosol | 46.2 | 13.1 |
| Zm00001d008691_P001 | Maize | cytosol | 30.41 | 11.95 |
| Zm00001d018355_P005 | Maize | cytosol, plastid | 17.54 | 8.09 |
| GSMUA_Achr11P... | Banana | cytosol | 14.04 | 8.0 |
| Solyc01g099400.2.1 | Tomato | mitochondrion | 11.7 | 6.31 |
Protein Annotations
| EnsemblPlants:Zm00001d015812_P001 | EnsemblPlants:Zm00001d015812_T001 | EnsemblPlantsGene:Zm00001d015812 | PANTHER:PTHR11227 | PANTHER:PTHR11227:SF18 | ProteinID:AQK69578.1 |
| SEG:seg | UniParc:UPI000221FE57 | UniProt:A0A1D6H425 | MapMan:35.1 | : | : |
Description
Autophagy-related protein 18a
Coordinates
chr5:-:122614530..122615045
Molecular Weight (calculated)
17842.8 Da
IEP (calculated)
3.863
GRAVY (calculated)
-0.257
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPASTPTP PNPNLVSGNP PSLLLQQQQE EEVPEPVPET APMPLTTSID PTPSGGEESE SDDSSSVWST PSSAPTPVPA PTLAPAAKDI LHISFNQDYG
101: FFTAGTNSGF HIYNCDPFRE IFRQDLAVEG GVGVGGGGGG IDVVEMLFRC NILALVGGGD NPHYPPNKVM I
101: FFTAGTNSGF HIYNCDPFRE IFRQDLAVEG GVGVGGGGGG IDVVEMLFRC NILALVGGGD NPHYPPNKVM I
001: MATVSSSSWP NPNPNPDSTS ASDSDSTFPS HRDRVDEPDS LDSFSSMSLN SDEPNQTSNQ SPLSPPTPNL PVMPPPSVLH LSFNQDHACF AVGTDRGFRI
101: LNCDPFREIF RRDFDRGGGV AVVEMLFRCN ILALVGGGPD PQYPPNKVMI WDDHQGRCIG ELSFRSDVRS VRLRRDRIIV VLEQKIFVYN FSDLKLMHQI
201: ETIANPKGLC AVSQGVGSMV LVCPGLQKGQ VRIEHYASKR TKFVMAHDSR IACFALTQDG HLLATASSKG TLVRIFNTVD GTLRQEVRRG ADRAEIYSLA
301: FSSNAQWLAV SSDKGTVHVF GLKVNSGSQV KDSSRIAPDA TPSSPSSSLS LFKGVLPRYF SSEWSVAQFR LVEGTQYIAA FGHQKNTVVI LGMDGR
101: LNCDPFREIF RRDFDRGGGV AVVEMLFRCN ILALVGGGPD PQYPPNKVMI WDDHQGRCIG ELSFRSDVRS VRLRRDRIIV VLEQKIFVYN FSDLKLMHQI
201: ETIANPKGLC AVSQGVGSMV LVCPGLQKGQ VRIEHYASKR TKFVMAHDSR IACFALTQDG HLLATASSKG TLVRIFNTVD GTLRQEVRRG ADRAEIYSLA
301: FSSNAQWLAV SSDKGTVHVF GLKVNSGSQV KDSSRIAPDA TPSSPSSSLS LFKGVLPRYF SSEWSVAQFR LVEGTQYIAA FGHQKNTVVI LGMDGR
Arabidopsis Description
ATG18AAutophagy-related protein 18a [Source:UniProtKB/Swiss-Prot;Acc:Q93VB2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.