Factsheet for Zm00001d018355_P005

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31257	Sorghum	cytosol	96.23	96.23
TraesCS6D01G335900.1	Wheat	cytosol, mitochondrion, plastid	76.82	76.41
TraesCS6B01G386200.1	Wheat	cytosol, mitochondrion, plastid	76.28	75.87
TraesCS6A01G353600.1	Wheat	cytosol, mitochondrion, plastid	76.28	75.87
Os02t0791800-01	Rice	cytosol	75.47	74.87
VIT_11s0037g00970.t01	Wine grape	cytosol	46.63	65.78
HORVU6Hr1G084430.3	Barley	cytosol	76.55	63.68
GSMUA_Achr9P13430_001	Banana	plastid	62.8	63.32
VIT_03s0091g00190.t01	Wine grape	plastid	15.9	62.77
KRH02984	Soybean	cytosol	58.49	58.81
KRH33489	Soybean	cytosol	22.91	58.22
KRH72365	Soybean	cytosol	57.41	57.88
AT4G30510.1	Thale cress	cytosol	56.6	57.38
KRH07770	Soybean	plastid	31.54	55.98
CDY39210	Canola	cytosol, plastid	55.26	55.86
CDX72248	Canola	plastid	55.26	55.86
Bra024070.1-P	Field mustard	plastid	54.99	55.74
Solyc07g006120.2.1	Tomato	cytosol	53.91	54.79
PGSC0003DMT400028996	Potato	cytosol	53.64	54.52
Zm00001d039703_P001	Maize	cytosol	27.49	24.46
Zm00001d042215_P002	Maize	cytosol, extracellular	28.3	23.39
Zm00001d008691_P001	Maize	cytosol	26.95	22.99
Zm00001d011920_P003	Maize	cytosol	27.76	21.33
Zm00001d010645_P001	Maize	cytosol	16.98	20.72
Zm00001d015812_P001	Maize	cytosol	8.09	17.54

Protein Annotations

EnsemblPlants:Zm00001d018355_P005	EnsemblPlants:Zm00001d018355_T005	EnsemblPlantsGene:Zm00001d018355	Gene3D:2.130.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015943	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat_dom_sf	PANTHER:PTHR11227	PANTHER:PTHR11227:SF17
ProteinID:AQK75701.1	SEG:seg	SUPFAM:SSF50978	UniParc:UPI000221BA88	UniProt:A0A1D6HN15	MapMan:19.3.2.1.3

Description

autophagy18ehomolog of yeast autophagy 18 (ATG18) B

Coordinates

chr5:-:219132800..219138725

Molecular Weight (calculated)

40535.4 Da

IEP (calculated)

8.464

GRAVY (calculated)

-0.036

Length

371 amino acids

Sequence
(BLAST)

001: MASSSSPSQV ICASFNQDNS MFSVGTKDGF KIFDARNGRL CYEKSLGGFN IVEMLFGTNL LAIVGTGEQP AMSPRRLCLF NTKTGASKRD LNFKTSILAV
101: RLSRKRLVVV LQDRTFVYDL NSTTILDEIE TVPNTKGLCA FAPNSEECYL ALPASTSKGS ALVYKASKPE LICQIDAHLA PLAAMVFSLN GMYLATASEK
201: GTMIRVHLVA QATKSHSFRR GTYPSTIYSL AFSPSVDLPD VLVATSSSGS LHMFFLDASR NARRQANTLF SSVIPGSVTD ALDPANHHVI HNVVTADIKS
301: CLAVHSVENS QNSSKFPSLK TVIYIVTHNG YFREYLIGTT KSNESSWLLE REFNLLDAYS GSPKQNELHI D

Best Arabidopsis Sequence Match ( AT4G30510.1 )
(BLAST)

001: MANLSSLPSP IYCVSFNQDN SGFAISWKDS FKIFDSTTGR LCYERAAGAF VIVEMLYSSD LLAIVGAGEQ ASLSPRRLCL FKTTTGLPLR ELNFLTSILA
101: VRMNKKRLVV VLLEKTFVYD LNTLVMLDTI DTVPNPKGLS AFSPSLEGCY LAVPASTTKG SVLVYNVMDL QSHSEIDAHR SPLAAIALSS NGMYIATGSE
201: QGTLIRVHLV SEATKSYSFR RGTYPSTIYS LSFGPSTQLP DILIATSSSG SIHAFSLSLA INQRSKRSTS FLGSVLPDSV SDALDPAHHH VLQNAVSSGI
301: RSYAVVRKID KLEGTSSPSH FTSLRATVSV ITYNGYFQEY TLSINNKNES LWTLEREFNL FSITTG

Arabidopsis Description

ATG18BAutophagy-related protein 18b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.