Factsheet for Os02t0791800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31257	Sorghum	cytosol	75.94	76.55
Zm00001d018355_P005	Maize	cytosol, plastid	74.87	75.47
TraesCS6D01G335900.1	Wheat	cytosol, mitochondrion, plastid	74.87	75.07
TraesCS6A01G353600.1	Wheat	cytosol, mitochondrion, plastid	74.87	75.07
TraesCS6B01G386200.1	Wheat	cytosol, mitochondrion, plastid	74.6	74.8
HORVU6Hr1G084430.3	Barley	cytosol	74.87	62.78
VIT_11s0037g00970.t01	Wine grape	cytosol	43.05	61.22
GSMUA_Achr9P13430_001	Banana	plastid	59.09	60.05
KRH72365	Soybean	cytosol	55.08	55.98
KRH02984	Soybean	cytosol	55.08	55.83
VIT_03s0091g00190.t01	Wine grape	plastid	13.9	55.32
KRH07770	Soybean	plastid	30.75	55.02
Solyc07g006120.2.1	Tomato	cytosol	51.6	52.88
PGSC0003DMT400028996	Potato	cytosol	51.34	52.6
Bra024070.1-P	Field mustard	plastid	51.07	52.19
AT4G30510.1	Thale cress	cytosol	51.07	52.19
CDY39210	Canola	cytosol, plastid	51.07	52.04
CDX72248	Canola	plastid	51.07	52.04
KRH33489	Soybean	cytosol	18.98	48.63
Os05t0169200-01	Rice	cytosol	27.27	26.7
Os01t0168500-01	Rice	cytosol	27.54	24.7
Os01t0934000-01	Rice	plasma membrane	29.14	23.85

Protein Annotations

MapMan:19.3.2.1.3	EntrezGene:4330978	EMBL:AK099697	ProteinID:BAD19175.1	ProteinID:BAF10275.1	ProteinID:BAS81322.1
ProteinID:EEE57952.1	GO:GO:0000422	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006497
GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0019538	GO:GO:0019898	GO:GO:0032266	GO:GO:0034045
GO:GO:0034497	GO:GO:0044804	GO:GO:0080025	InterPro:IPR001680	EnsemblPlantsGene:Os02g0791800	EnsemblPlants:Os02t0791800-01
PANTHER:PTHR11227	PANTHER:PTHR11227:SF17	UniProt:Q6K9M2	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI00003757A7
InterPro:WD40_repeat	InterPro:WD40_repeat_dom_sf	RefSeq:XP_015627655.1	SEG:seg	:	:

Description

AUTOPHAGY ASSOCIATED GENE 18AWD-40 repeat containing protein. (Os02t0791800-01);WD-40 repeat containing protein. (Os02t0791800-02)

Coordinates

chr2:-:33629638..33633614

Molecular Weight (calculated)

40877.8 Da

IEP (calculated)

8.806

GRAVY (calculated)

-0.140

Length

374 amino acids

Sequence
(BLAST)

001: MASSSSPPPP PQIRCASFNQ DNSLFYVGTK DGFRIFDAHT GKLHYQKNIG GIGNMEMYFR TNILAIVGTG EQPVLSPRCL RLIDTVAAVT KKDLNFKTSV
101: LAVRLSRTRL VVVLQDRTFI YDVNSTTILE EIETVPNTKG LCAFAPNSEA CYLAIPASTS KGSALVYKAS EPELICQIDA HESPLAAMAF SSNGTYLATA
201: SGKGTIIRVF LVAQATKSHS FRRGTYPSTI YSLSFGPSDD LPDVLVATSS SGSLHMFFLD AARNRRNQTS KLLGSMIPGA ITRALDPANH HIIHNVIPAG
301: IKSCVAVHKV ENSQNSSKLP ALRTVVYIIT HDGYFREYSI NTTKSNESSW VLQRELNLLD TGCSTPQREE QHKD

Best Arabidopsis Sequence Match ( AT4G30510.1 )
(BLAST)

001: MANLSSLPSP IYCVSFNQDN SGFAISWKDS FKIFDSTTGR LCYERAAGAF VIVEMLYSSD LLAIVGAGEQ ASLSPRRLCL FKTTTGLPLR ELNFLTSILA
101: VRMNKKRLVV VLLEKTFVYD LNTLVMLDTI DTVPNPKGLS AFSPSLEGCY LAVPASTTKG SVLVYNVMDL QSHSEIDAHR SPLAAIALSS NGMYIATGSE
201: QGTLIRVHLV SEATKSYSFR RGTYPSTIYS LSFGPSTQLP DILIATSSSG SIHAFSLSLA INQRSKRSTS FLGSVLPDSV SDALDPAHHH VLQNAVSSGI
301: RSYAVVRKID KLEGTSSPSH FTSLRATVSV ITYNGYFQEY TLSINNKNES LWTLEREFNL FSITTG

Arabidopsis Description

ATG18BAutophagy-related protein 18b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.