Factsheet for VIT_03s0091g00190.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33489	Soybean	cytosol	62.77	40.41
VIT_11s0037g00970.t01	Wine grape	cytosol	86.17	30.8
KRH07770	Soybean	plastid	60.64	27.27
Solyc07g006120.2.1	Tomato	cytosol	75.53	19.45
PGSC0003DMT400028996	Potato	cytosol	75.53	19.45
GSMUA_Achr9P13430_001	Banana	plastid	73.4	18.75
KRH72365	Soybean	cytosol	73.4	18.75
KRH02984	Soybean	cytosol	73.4	18.7
AT4G30510.1	Thale cress	cytosol	72.34	18.58
Bra024070.1-P	Field mustard	plastid	71.28	18.31
CDY39210	Canola	cytosol, plastid	71.28	18.26
CDX72248	Canola	plastid	70.21	17.98
Zm00001d018355_P005	Maize	cytosol, plastid	62.77	15.9
KXG31257	Sorghum	cytosol	62.77	15.9
TraesCS6B01G386200.1	Wheat	cytosol, mitochondrion, plastid	58.51	14.75
TraesCS6D01G335900.1	Wheat	cytosol, mitochondrion, plastid	58.51	14.75
TraesCS6A01G353600.1	Wheat	cytosol, mitochondrion, plastid	57.45	14.48
Os02t0791800-01	Rice	cytosol	55.32	13.9
HORVU6Hr1G084430.3	Barley	cytosol	58.51	12.33
VIT_13s0067g00170.t01	Wine grape	cytosol, plastid	31.91	7.32
VIT_07s0104g01790.t01	Wine grape	plastid	29.79	6.6
VIT_14s0060g02380.t01	Wine grape	plastid	29.79	6.59
VIT_07s0104g01780.t01	Wine grape	plastid	28.72	6.15

Protein Annotations

MapMan:35.1	ProteinID:CBI22514	ProteinID:CBI22514.3	UniProt:D7SXW4	EMBL:FN595242	GO:GO:0000422
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006464	GO:GO:0006497	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0019538
GO:GO:0019898	GO:GO:0032266	GO:GO:0034045	GO:GO:0034497	GO:GO:0044804	GO:GO:0080025
PANTHER:PTHR11227	PANTHER:PTHR11227:SF17	UniParc:UPI00015CD72E	ArrayExpress:VIT_03s0091g00190	EnsemblPlantsGene:VIT_03s0091g00190	EnsemblPlants:VIT_03s0091g00190.t01

Description

No Description!

Coordinates

chr3:+:6447349..6451553

Molecular Weight (calculated)

10317.7 Da

IEP (calculated)

9.306

GRAVY (calculated)

0.282

Length

94 amino acids

Sequence
(BLAST)

1: MLFSSSLLAI VGAGEQLSLS PRRLCLFNTT TGAALQELNF STAVLAIRLN WKRLVVVLQE KTYIYDLNSL SILDTIDTVP NSKGEGRTSC KVIK

Best Arabidopsis Sequence Match ( AT4G30510.2 )
(BLAST)

001: MLYSSDLLAI VGAGEQASLS PRRLCLFKTT TGLPLRELNF LTSILAVRMN KKRLVVVLLE KTFVYDLNTL VMLDTIDTVP NPKGLSAFSP SLEGCYLAVP
101: ASTTKGSVLV YNVMDLQSHS EIDAHRSPLA AIALSSNGMY IATGSEQGTL IRVHLVSEAT KSYSFRRGTY PSTIYSLSFG PSTQLPDILI ATSSSGSIHA
201: FSLSLAINQR SKRSTSFLGS VLPDSVSDAL DPAHHHVLQN AVSSGIRSYA VVRKIDKLEG TSSPSHFTSL RATVSVITYN GYFQEYTLSI NNKNESLWTL
301: EREFNLFSIT TG

Arabidopsis Description

ATG18BAutophagy-related protein 18b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.