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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 3
  • plastid 3
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH64240 Soybean cytosol, plastid 74.88 73.27
KRH53692 Soybean plastid 74.15 72.38
AT2G40810.1 Thale cress cytosol 69.02 72.01
CDY27213 Canola cytosol 67.8 71.83
CDX72134 Canola cytosol 67.56 71.58
CDX72135 Canola cytosol 67.56 71.58
Solyc06g048510.2.1 Tomato cytosol 71.71 70.67
AT3G56440.1 Thale cress cytosol 67.07 70.33
Bra016968.1-P Field mustard cytosol, plastid 69.27 69.61
CDY06959 Canola cytosol, plastid 68.54 68.87
TraesCS3D01G095500.1 Wheat cytosol 69.76 68.59
TraesCS3B01G110900.1 Wheat cytosol 69.76 68.59
TraesCS3A01G095300.1 Wheat cytosol 69.76 68.59
HORVU3Hr1G017150.1 Barley cytosol 69.76 68.59
CDY14745 Canola cytosol, plastid 68.05 68.38
Os01t0168500-01 Rice cytosol 69.51 68.35
Zm00001d039703_P001 Maize cytosol 69.02 67.87
OQU86240 Sorghum cytosol 69.51 67.86
GSMUA_Achr10P... Banana cytosol, plastid 68.78 67.46
Zm00001d008691_P001 Maize cytosol 68.78 64.83
TraesCS1D01G114300.1 Wheat cytosol 54.88 58.44
TraesCS1B01G132900.1 Wheat cytosol 54.39 57.92
TraesCS1A01G112700.1 Wheat cytosol 54.15 57.66
GSMUA_AchrUn_... Banana cytosol, plastid 59.02 57.21
HORVU3Hr1G017140.1 Barley extracellular, plasma membrane 9.51 56.52
Os05t0169200-01 Rice cytosol 52.2 56.02
VIT_14s0060g02380.t01 Wine grape plastid 55.12 53.18
VIT_07s0104g01790.t01 Wine grape plastid 54.88 53.07
VIT_07s0104g01780.t01 Wine grape plastid 56.34 52.62
KXG21420 Sorghum peroxisome 44.63 45.86
VIT_11s0037g00970.t01 Wine grape cytosol 20.98 32.7
VIT_03s0091g00190.t01 Wine grape plastid 7.32 31.91
Protein Annotations
EntrezGene:100248334wikigene:100248334MapMan:19.3.2.1.3Gene3D:2.130.10.10ProteinID:CCB49889ProteinID:CCB49889.1
UniProt:F6HC09EMBL:FN595514GO:GO:0000422GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0006464
GO:GO:0006497GO:GO:0008150GO:GO:0008152GO:GO:0008289GO:GO:0009056GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0019538GO:GO:0019898GO:GO:0032266
GO:GO:0034045GO:GO:0034497GO:GO:0044804GO:GO:0080025InterPro:IPR001680InterPro:IPR015943
EntrezGene:LOC100248334wikigene:LOC100248334PFAM:PF00400PANTHER:PTHR11227PANTHER:PTHR11227:SF45SMART:SM00320
SUPFAM:SSF50978UniParc:UPI00015CB058ArrayExpress:VIT_13s0067g00170EnsemblPlantsGene:VIT_13s0067g00170EnsemblPlants:VIT_13s0067g00170.t01unigene:Vvi.11942
InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_dom_sfRefSeq:XP_002267266RefSeq:XP_002267266.1:
Description
No Description!
Coordinates
chr13:-:116979..119653
Molecular Weight (calculated)
45352.9 Da
IEP (calculated)
7.832
GRAVY (calculated)
-0.159
Length
410 amino acids
Sequence
(BLAST)
001: MSSSVSTSRG MLPSARLDAH GSNSGTPGSF GQSVPEFNDT DETGLLSVSW NQDHGCFAAG TTHGFRIYSC DPFKEIFRRD LKSGGFGIVE MLFRSNILAL
101: VGAGTNSQYP PSKVIIWDDY ERRCIGEFSF RSDVRAVKLR RDRIVVVVEH KIYVYNFTDL KLLQQIETLA NPRGLCCLSH HSNTFVLACP GLQRGLVRIE
201: HFGLNMTKLI KAHDSHVACL TLTMDGLLLA SASMKGTLIR IFNTMDGTRL QEVRRGSDNA EIYSIALSPN VQWLAVSSEK GTVHIFNLRV RVVGEDSSNH
301: SITAQGPAPF YRNSSNSLDA LISPNAGANP GSSLSFMKGF LPKYFSSEWS FAQFRVPEDT QFIATFGSQN TVIIVGMDGS FYRCSFDHLN GGEMLQQEYH
401: SFLKKGHLES
Best Arabidopsis Sequence Match ( AT2G40810.1 )
(BLAST)
001: MSSTVSNPQG ILQPGSFLLP ESESMKKEEA ELVSVCWNQD SSCFAAGTSH GFRIYNCEPF KETFRRELKD GGFKIVEMLF RSNILALVGG GPNSQYPSSK
101: VLIWDDHQSR CISEFAFRSE IRAVKLRRDR IVVVLEHKIY VYNFMDLRLL HQIETQANPR GLCCLSHHSN TSVLACPGLN RGEIRVEHFG LNMVQIINAH
201: DSSIACMTLT LDGLLLATAS TKGTLIRIFN TMDGTRLQEV RRGVDRADIY SIALSPNVQW LAVSSDKGTV HIFSLRVRVV GEDSYSTENG ALLTQQNYSN
301: SLQGLVSPTI GTNPGSSLSF MRGVLPKYFS SEWSYAQFHV SEVTQFFAAF GSNNTVAIIG MDGSFYRCSF DPVNGGEMGQ LEYIHFMKMD NRP
Arabidopsis Description
ATG18CAutophagy-related protein 18c [Source:UniProtKB/Swiss-Prot;Acc:Q8GYD7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.