Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G294200.2 | Wheat | nucleus | 88.99 | 91.73 |
| TraesCS5A01G286600.1 | Wheat | nucleus | 86.24 | 88.47 |
| TraesCS5B01G285900.2 | Wheat | nucleus | 55.5 | 88.0 |
| Os09t0506900-01 | Rice | nucleus | 48.17 | 67.52 |
| Zm00001d006090_P002 | Maize | nucleus | 59.63 | 59.63 |
| OQU89749 | Sorghum | nucleus | 43.35 | 59.25 |
| Zm00001d021054_P002 | Maize | mitochondrion, nucleus | 36.24 | 53.92 |
| GSMUA_Achr8P17850_001 | Banana | nucleus | 27.29 | 45.95 |
| VIT_17s0000g01350.t01 | Wine grape | nucleus | 41.97 | 43.78 |
| AT4G24900.1 | Thale cress | nucleus | 37.39 | 38.72 |
| CDY03408 | Canola | nucleus | 33.72 | 38.08 |
| CDY34322 | Canola | nucleus | 33.49 | 37.73 |
| Bra013844.1-P | Field mustard | nucleus | 33.03 | 35.82 |
| Solyc03g098330.2.1 | Tomato | nucleus | 34.17 | 35.73 |
| KRH54182 | Soybean | cytosol | 32.34 | 35.52 |
| PGSC0003DMT400065842 | Potato | nucleus | 33.72 | 35.51 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G076330.27 | EnsemblPlantsGene:HORVU5Hr1G076330 | InterPro:CCDC84 | PANTHER:PTHR31198 | PFAM:PF14968 | SEG:seg |
| UniParc:UPI000B469710 | UniProt:A0A287RV09 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:550827619..550831241
Molecular Weight (calculated)
47732.0 Da
IEP (calculated)
9.037
GRAVY (calculated)
-0.769
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: RERTPGPPRP TGQEPRPAMP PKPHAAGGGS FEYCELCRRN HDQGRRHRYF PAHRAALAAA LSGFHAKLAD LRRALLHPST PGPRSRLWCP FCSADLVDLD
101: SRFACSNAIY HLASEEHLKG VKDFLRKHGG GMDHVDSFRI SEDELAKWEK GCESSITDEQ TLTKGLVGPS LGPLKDIQNE SSSKISDSFA ETDIPSFHNT
201: ASCVVMPLQS PTNGAYYPTS TACYGSSNSG SVAYSAPFGT SGLPVKPWVT THEHQGMPST NMFHSADAQM KGAQPTSLGN GPNSPASSFV HVQQGHSGGK
301: FNQGLKANVH TGAPPPWLEA SEHDPKNVSL LSSLKGKSRK LNPKRVGAAW AERRRAEMEM EKRGEVVPEM PDASWLPNFG GVWQSGSRKE SRKEFEKNHK
401: LQEKNNPELL PEIKPYISKR MRVSSNKDGQ PDSTVE
101: SRFACSNAIY HLASEEHLKG VKDFLRKHGG GMDHVDSFRI SEDELAKWEK GCESSITDEQ TLTKGLVGPS LGPLKDIQNE SSSKISDSFA ETDIPSFHNT
201: ASCVVMPLQS PTNGAYYPTS TACYGSSNSG SVAYSAPFGT SGLPVKPWVT THEHQGMPST NMFHSADAQM KGAQPTSLGN GPNSPASSFV HVQQGHSGGK
301: FNQGLKANVH TGAPPPWLEA SEHDPKNVSL LSSLKGKSRK LNPKRVGAAW AERRRAEMEM EKRGEVVPEM PDASWLPNFG GVWQSGSRKE SRKEFEKNHK
401: LQEKNNPELL PEIKPYISKR MRVSSNKDGQ PDSTVE
001: MKKPSKKSEI EFCTVCRFHH DQGSRHKYFP RHKSSLSSLL DRFRSKIADV RFFLKNPSVL RPQEQSQNRV WCVFCDEDIV ELGSSFACSK AINHFASSDH
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQENYQVSQD KKQIDGSYNP PGVVGMTSIS SSHSTDAGGN VHSGAPPPWL
301: DANDGDFSSV QLNQSDVARF QAKVPGKNRK LNPNRVGAAW AERRKIEIEM EKSGHVTKSN IDPDWLPNFG RVWQSGTRKE SRKEFEKEKR KLVKTESIST
401: ESEPVKIQPY ISKRARRESG E
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQENYQVSQD KKQIDGSYNP PGVVGMTSIS SSHSTDAGGN VHSGAPPPWL
301: DANDGDFSSV QLNQSDVARF QAKVPGKNRK LNPNRVGAAW AERRKIEIEM EKSGHVTKSN IDPDWLPNFG RVWQSGTRKE SRKEFEKEKR KLVKTESIST
401: ESEPVKIQPY ISKRARRESG E
Arabidopsis Description
TTLTITAN-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JRR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.