Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5B01G285900.2 | Wheat | nucleus | 63.67 | 72.0 |
TraesCS5D01G294200.2 | Wheat | nucleus | 66.88 | 49.17 |
TraesCS5A01G286600.1 | Wheat | nucleus | 66.56 | 48.71 |
HORVU5Hr1G076330.27 | Barley | extracellular, nucleus | 67.52 | 48.17 |
GSMUA_Achr8P17850_001 | Banana | nucleus | 35.05 | 42.08 |
Zm00001d006090_P002 | Maize | nucleus | 55.95 | 39.91 |
OQU89749 | Sorghum | nucleus | 38.91 | 37.93 |
Zm00001d021054_P002 | Maize | mitochondrion, nucleus | 27.65 | 29.35 |
VIT_17s0000g01350.t01 | Wine grape | nucleus | 36.33 | 27.03 |
AT4G24900.1 | Thale cress | nucleus | 31.19 | 23.04 |
PGSC0003DMT400065842 | Potato | nucleus | 29.9 | 22.46 |
Solyc03g098330.2.1 | Tomato | nucleus | 29.9 | 22.3 |
CDY03408 | Canola | nucleus | 27.65 | 22.28 |
CDY34322 | Canola | nucleus | 26.37 | 21.19 |
KRH54182 | Soybean | cytosol | 27.01 | 21.16 |
Bra013844.1-P | Field mustard | nucleus | 26.69 | 20.65 |
Protein Annotations
EMBL:AK066669 | EnsemblPlants:Os09t0506900-01 | EnsemblPlantsGene:Os09g0506900 | InterPro:CCDC84 | PANTHER:PTHR31198 | PFAM:PF14968 |
ProteinID:BAT08869.1 | SEG:seg | UniParc:UPI000188AD3D | UniProt:B7ECI1 | MapMan:35.1 | : |
Description
Conserved hypothetical protein. (Os09t0506900-01);Similar to cDNA clone:J013073G03, full insert sequence. (Os09t0506900-02)
Coordinates
chr9:+:19630562..19634603
Molecular Weight (calculated)
33855.7 Da
IEP (calculated)
8.218
GRAVY (calculated)
-0.349
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPKRGAAPA AAFEYCELCR RNHDQGRRHR YFPAHRAALA AALSRFRSKL LDLRRALRHP SSAARSRLWC PFCSADLVDL DSRFACSNAI YHLASQDHLN
101: GVKAFLQKHG GGMDQVDSFR ISEDELAKWE KCCESSSTEQ ETSTEGLIGP SLGPLKDIRN KSTSKHLDNF AETYIPSSSN TASNVVMPLQ SPTNGAYYPN
201: STACQGSSSF GSIPYSAPFE TFGVPIIPCG SVALHEQQVM LGTDLFQSAG TKMKGGQLTI LGNGPNSSVS CSVHVQQRNS GGNSSQGTTH FYSFSNIYIY
301: IFVTISVEAC H
101: GVKAFLQKHG GGMDQVDSFR ISEDELAKWE KCCESSSTEQ ETSTEGLIGP SLGPLKDIRN KSTSKHLDNF AETYIPSSSN TASNVVMPLQ SPTNGAYYPN
201: STACQGSSSF GSIPYSAPFE TFGVPIIPCG SVALHEQQVM LGTDLFQSAG TKMKGGQLTI LGNGPNSSVS CSVHVQQRNS GGNSSQGTTH FYSFSNIYIY
301: IFVTISVEAC H
001: MKKPSKKSEI EFCTVCRFHH DQGSRHKYFP RHKSSLSSLL DRFRSKIADV RFFLKNPSVL RPQEQSQNRV WCVFCDEDIV ELGSSFACSK AINHFASSDH
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQENYQVSQD KKQIDGSYNP PGVVGMTSIS SSHSTDAGGN VHSGAPPPWL
301: DANDGDFSSV QLNQSDVARF QAKVPGKNRK LNPNRVGAAW AERRKIEIEM EKSGHVTKSN IDPDWLPNFG RVWQSGTRKE SRKEFEKEKR KLVKTESIST
401: ESEPVKIQPY ISKRARRESG E
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQENYQVSQD KKQIDGSYNP PGVVGMTSIS SSHSTDAGGN VHSGAPPPWL
301: DANDGDFSSV QLNQSDVARF QAKVPGKNRK LNPNRVGAAW AERRKIEIEM EKSGHVTKSN IDPDWLPNFG RVWQSGTRKE SRKEFEKEKR KLVKTESIST
401: ESEPVKIQPY ISKRARRESG E
Arabidopsis Description
TTLTITAN-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JRR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.