Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g098330.2.1 | Tomato | nucleus | 90.58 | 89.93 |
| VIT_17s0000g01350.t01 | Wine grape | nucleus | 47.58 | 47.13 |
| GSMUA_Achr8P17850_001 | Banana | nucleus | 26.09 | 41.7 |
| KRH54182 | Soybean | cytosol | 38.16 | 39.8 |
| CDY34322 | Canola | nucleus | 36.72 | 39.28 |
| AT4G24900.1 | Thale cress | nucleus | 39.86 | 39.19 |
| CDY03408 | Canola | nucleus | 36.47 | 39.12 |
| Bra013844.1-P | Field mustard | nucleus | 37.2 | 38.31 |
| TraesCS5D01G294200.2 | Wheat | nucleus | 35.75 | 34.99 |
| TraesCS5A01G286600.1 | Wheat | nucleus | 35.75 | 34.82 |
| HORVU5Hr1G076330.27 | Barley | extracellular, nucleus | 35.51 | 33.72 |
| Zm00001d006090_P002 | Maize | nucleus | 35.51 | 33.72 |
| OQU89749 | Sorghum | nucleus | 25.6 | 33.23 |
| TraesCS5B01G285900.2 | Wheat | nucleus | 21.26 | 32.0 |
| Zm00001d021054_P002 | Maize | mitochondrion, nucleus | 21.26 | 30.03 |
| Os09t0506900-01 | Rice | nucleus | 22.46 | 29.9 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400065842 | EnsemblPlantsGene:PGSC0003DMG400025629 | InterPro:CCDC84 | PANTHER:PTHR31198 | PFAM:PF14968 | PGSC:PGSC0003DMG400025629 |
| SEG:seg | UniParc:UPI0002956150 | UniProt:M1CEP1 | MapMan:35.1 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400025629]
Coordinates
chr3:-:44676118..44682124
Molecular Weight (calculated)
46489.0 Da
IEP (calculated)
9.539
GRAVY (calculated)
-0.633
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNDKQFEFC VVCKLNHNQR RRHNFLPNHK KSLAAVLSRF QSKLSDIRFF LKNPIPLRPE HASLNRLWCI FCECDILELD SFYASDNAIR HLSGADHMKK
101: VKGFLWKYGG GMDKVDTLRI TETDFTKWEK KCNLSKKGAL DGGSRATSIG PSNDIQNKTN SDYLNCFEKD NIHALNVDVA NSVVPLQNYT NERSQIFENK
201: MHSVTNGPNM RSTCMGVQLG EDACSSSGLS NAQKILGFHA TASHQCLNGG SVTSDGRMTK GMKSSLGTPS ITQISLTFQE DSLGNVHSGA PPPWFNVAEK
301: SQLDFISNPG RSDPFPPNQK KKSKLNPNRV GAAWAERRRV ELELESKGEL VTNTFNVNWL PNFGRVWQSG TRKESRKEFE LGNHKSSEVE SQSQSMVQLQ
401: PYVSKRKVSY CISI
101: VKGFLWKYGG GMDKVDTLRI TETDFTKWEK KCNLSKKGAL DGGSRATSIG PSNDIQNKTN SDYLNCFEKD NIHALNVDVA NSVVPLQNYT NERSQIFENK
201: MHSVTNGPNM RSTCMGVQLG EDACSSSGLS NAQKILGFHA TASHQCLNGG SVTSDGRMTK GMKSSLGTPS ITQISLTFQE DSLGNVHSGA PPPWFNVAEK
301: SQLDFISNPG RSDPFPPNQK KKSKLNPNRV GAAWAERRRV ELELESKGEL VTNTFNVNWL PNFGRVWQSG TRKESRKEFE LGNHKSSEVE SQSQSMVQLQ
401: PYVSKRKVSY CISI
001: MKKPSKKSEI EFCTVCRFHH DQGSRHKYFP RHKSSLSSLL DRFRSKIADV RFFLKNPSVL RPQEQSQNRV WCVFCDEDIV ELGSSFACSK AINHFASSDH
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQEVSQDKKQ IDGSYNPPGV VGMTSISSSH STDAGGNVHS GAPPPWLDAN
301: DGDFSSVQLN QSDVARFQAK VPGKNRKLNP NRVGAAWAER RKIEIEMEKS GHVTKSNIDP DWLPNFGRVW QSGTRKESRK EFEKEKRKLV KTESISTESE
401: PVKIQPYISK RARRESGE
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQEVSQDKKQ IDGSYNPPGV VGMTSISSSH STDAGGNVHS GAPPPWLDAN
301: DGDFSSVQLN QSDVARFQAK VPGKNRKLNP NRVGAAWAER RKIEIEMEKS GHVTKSNIDP DWLPNFGRVW QSGTRKESRK EFEKEKRKLV KTESISTESE
401: PVKIQPYISK RARRESGE
Arabidopsis Description
TTLTITAN-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JRR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.