Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006090_P002 | Maize | nucleus | 70.65 | 47.48 |
| OQU89749 | Sorghum | nucleus | 47.1 | 43.26 |
| TraesCS5A01G286600.1 | Wheat | nucleus | 55.97 | 38.59 |
| TraesCS5D01G294200.2 | Wheat | nucleus | 55.63 | 38.53 |
| HORVU5Hr1G076330.27 | Barley | extracellular, nucleus | 53.92 | 36.24 |
| TraesCS5B01G285900.2 | Wheat | nucleus | 30.38 | 32.36 |
| Os09t0506900-01 | Rice | nucleus | 29.35 | 27.65 |
| VIT_17s0000g01350.t01 | Wine grape | nucleus | 31.74 | 22.25 |
| CDY34322 | Canola | nucleus | 29.01 | 21.96 |
| AT4G24900.1 | Thale cress | nucleus | 31.4 | 21.85 |
| Solyc03g098330.2.1 | Tomato | nucleus | 30.38 | 21.34 |
| PGSC0003DMT400065842 | Potato | nucleus | 30.03 | 21.26 |
| CDY03408 | Canola | nucleus | 27.99 | 21.24 |
| Bra013844.1-P | Field mustard | nucleus | 28.33 | 20.65 |
| GSMUA_Achr8P17850_001 | Banana | nucleus | 18.09 | 20.46 |
| KRH54182 | Soybean | cytosol | 22.18 | 16.37 |
Protein Annotations
| EnsemblPlants:Zm00001d021054_P002 | EnsemblPlants:Zm00001d021054_T002 | EnsemblPlantsGene:Zm00001d021054 | InterPro:CCDC84 | PANTHER:PTHR31198 | PFAM:PF14968 |
| ProteinID:ONM56223.1 | SEG:seg | UniParc:UPI0008429BFD | UniProt:A0A1D6I851 | MapMan:35.1 | : |
Description
TITAN-like protein
Coordinates
chr7:+:141615736..141619939
Molecular Weight (calculated)
32118.6 Da
IEP (calculated)
9.589
GRAVY (calculated)
-0.658
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPLPSRRG PVIGVPSAPL TSSTSTAAPL EAWGKDEVDL LRISEEVLAK WEKGFGSLST RAKNIQNEYT CDSLDSFAQN NIPSFSNNAS YFVMPLQSPT
101: NVAYDPISTA CHRASSSGSA PYSSPYGACG LPITHWGSAE THKQQGMLSA NWFHSSGPAT KGHQSTVLVN DTRQLISCTD HAQANVHTGA PPRLKANGHD
201: LKNLSLRSCG LPSRKGNLRK LNPKRVGAAW AEKRRAELEM EKEGEIVPIT SDSSWLPNFG SVWQSGTRKE SRKEFEKNHK FHDTKSNMTY PWR
101: NVAYDPISTA CHRASSSGSA PYSSPYGACG LPITHWGSAE THKQQGMLSA NWFHSSGPAT KGHQSTVLVN DTRQLISCTD HAQANVHTGA PPRLKANGHD
201: LKNLSLRSCG LPSRKGNLRK LNPKRVGAAW AEKRRAELEM EKEGEIVPIT SDSSWLPNFG SVWQSGTRKE SRKEFEKNHK FHDTKSNMTY PWR
001: MKKPSKKSEI EFCTVCRFHH DQGSRHKYFP RHKSSLSSLL DRFRSKIADV RFFLKNPSVL RPQEQSQNRV WCVFCDEDIV ELGSSFACSK AINHFASSDH
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQEVSQDKKQ IDGSYNPPGV VGMTSISSSH STDAGGNVHS GAPPPWLDAN
301: DGDFSSVQLN QSDVARFQAK VPGKNRKLNP NRVGAAWAER RKIEIEMEKS GHVTKSNIDP DWLPNFGRVW QSGTRKESRK EFEKEKRKLV KTESISTESE
401: PVKIQPYISK RARRESGE
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQEVSQDKKQ IDGSYNPPGV VGMTSISSSH STDAGGNVHS GAPPPWLDAN
301: DGDFSSVQLN QSDVARFQAK VPGKNRKLNP NRVGAAWAER RKIEIEMEKS GHVTKSNIDP DWLPNFGRVW QSGTRKESRK EFEKEKRKLV KTESISTESE
401: PVKIQPYISK RARRESGE
Arabidopsis Description
TTLTITAN-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JRR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.