Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006090_P002 | Maize | nucleus | 81.5 | 59.63 |
| Zm00001d021054_P002 | Maize | mitochondrion, nucleus | 43.26 | 47.1 |
| TraesCS5D01G294200.2 | Wheat | nucleus | 60.19 | 45.39 |
| TraesCS5A01G286600.1 | Wheat | nucleus | 60.19 | 45.18 |
| HORVU5Hr1G076330.27 | Barley | extracellular, nucleus | 59.25 | 43.35 |
| TraesCS5B01G285900.2 | Wheat | nucleus | 36.36 | 42.18 |
| Os09t0506900-01 | Rice | nucleus | 37.93 | 38.91 |
| VIT_17s0000g01350.t01 | Wine grape | nucleus | 36.68 | 27.99 |
| CDY34322 | Canola | nucleus | 33.86 | 27.91 |
| CDY03408 | Canola | nucleus | 33.54 | 27.72 |
| Bra013844.1-P | Field mustard | nucleus | 33.54 | 26.62 |
| KRH54182 | Soybean | cytosol | 32.6 | 26.2 |
| Solyc03g098330.2.1 | Tomato | nucleus | 33.86 | 25.9 |
| AT4G24900.1 | Thale cress | nucleus | 34.17 | 25.89 |
| GSMUA_Achr8P17850_001 | Banana | nucleus | 21.0 | 25.87 |
| PGSC0003DMT400065842 | Potato | nucleus | 33.23 | 25.6 |
Protein Annotations
| EnsemblPlants:OQU89749 | EnsemblPlantsGene:SORBI_3002G257750 | InterPro:CCDC84 | PANTHER:PTHR31198 | PFAM:PF14968 | ProteinID:OQU89749 |
| ProteinID:OQU89749.1 | SEG:seg | UniParc:UPI0009DC8B2B | UniProt:A0A1W0W5R4 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr2:+:64350341..64353713
Molecular Weight (calculated)
35635.0 Da
IEP (calculated)
10.096
GRAVY (calculated)
-0.740
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAKPPPAAE FEYCELCRHH HDHGRRHRYV TKHRRNLDAA LSSFRSKLSD LRRAFLHGSP SSQPPRVRLW CPFCSTDLVD LDSRSAGKNG IYHLASSEHL
101: KGVKDFLRKH GGACHGASSS GSAPYSAPYG TVGLPITPWG SVETHKQQGA LSTNLFHSSH PQTKGHQSTV LVNDARPSIS CSNHVQQSHT GGNLSNANEH
201: DPKNLPLRSC ALPSRKGKLR KLNPKRVGAA WAERRRAEME LEKQGEIDPA TSDSSWLPNF GSVWQSGTRK ESKKDFEKSY KLHDMESNHD LSLEIKPYIS
301: KRMVNMIFDL SISFFSILT
101: KGVKDFLRKH GGACHGASSS GSAPYSAPYG TVGLPITPWG SVETHKQQGA LSTNLFHSSH PQTKGHQSTV LVNDARPSIS CSNHVQQSHT GGNLSNANEH
201: DPKNLPLRSC ALPSRKGKLR KLNPKRVGAA WAERRRAEME LEKQGEIDPA TSDSSWLPNF GSVWQSGTRK ESKKDFEKSY KLHDMESNHD LSLEIKPYIS
301: KRMVNMIFDL SISFFSILT
001: MKKPSKKSEI EFCTVCRFHH DQGSRHKYFP RHKSSLSSLL DRFRSKIADV RFFLKNPSVL RPQEQSQNRV WCVFCDEDIV ELGSSFACSK AINHFASSDH
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQENYQVSQD KKQIDGSYNP PGVVGMTSIS SSHSTDAGGN VHSGAPPPWL
301: DANDGDFSSV QLNQSDVARF QAKVPGKNRK LNPNRVGAAW AERRKIEIEM EKSGHVTKSN IDPDWLPNFG RVWQSGTRKE SRKEFEKEKR KLVKTESIST
401: ESEPVKIQPY ISKRARRESG E
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQENYQVSQD KKQIDGSYNP PGVVGMTSIS SSHSTDAGGN VHSGAPPPWL
301: DANDGDFSSV QLNQSDVARF QAKVPGKNRK LNPNRVGAAW AERRKIEIEM EKSGHVTKSN IDPDWLPNFG RVWQSGTRKE SRKEFEKEKR KLVKTESIST
401: ESEPVKIQPY ISKRARRESG E
Arabidopsis Description
TTLTITAN-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JRR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.