Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89749 | Sorghum | nucleus | 59.63 | 81.5 |
| Zm00001d021054_P002 | Maize | mitochondrion, nucleus | 47.48 | 70.65 |
| TraesCS5A01G286600.1 | Wheat | nucleus | 60.32 | 61.88 |
| TraesCS5D01G294200.2 | Wheat | nucleus | 59.86 | 61.7 |
| TraesCS5B01G285900.2 | Wheat | nucleus | 38.07 | 60.36 |
| HORVU5Hr1G076330.27 | Barley | extracellular, nucleus | 59.63 | 59.63 |
| Os09t0506900-01 | Rice | nucleus | 39.91 | 55.95 |
| GSMUA_Achr8P17850_001 | Banana | nucleus | 24.77 | 41.7 |
| VIT_17s0000g01350.t01 | Wine grape | nucleus | 38.53 | 40.19 |
| CDY34322 | Canola | nucleus | 33.26 | 37.47 |
| CDY03408 | Canola | nucleus | 33.03 | 37.31 |
| AT4G24900.1 | Thale cress | nucleus | 35.55 | 36.82 |
| Solyc03g098330.2.1 | Tomato | nucleus | 35.09 | 36.69 |
| Bra013844.1-P | Field mustard | nucleus | 32.8 | 35.57 |
| PGSC0003DMT400065842 | Potato | nucleus | 33.72 | 35.51 |
| KRH54182 | Soybean | cytosol | 30.05 | 33.0 |
Protein Annotations
| EnsemblPlants:Zm00001d006090_P002 | EnsemblPlants:Zm00001d006090_T002 | EnsemblPlantsGene:Zm00001d006090 | EntrezGene:100382690 | InterPro:CCDC84 | PANTHER:PTHR31198 |
| PFAM:PF14968 | ProteinID:ONM22775.1 | SEG:seg | UniParc:UPI0008429A19 | UniProt:A0A1D6ESU1 | MapMan:35.1 |
Description
TITAN-like protein
Coordinates
chr2:+:197865474..197870127
Molecular Weight (calculated)
48042.6 Da
IEP (calculated)
9.876
GRAVY (calculated)
-0.678
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPKPAKPTP ATEFEYCELC RHHHDHGRRH RYIVKHRRNL DAALTCFRSK LSDLRRAFLP GSPSSQPPRT RLWCPFCSID LVDLDSRSAG NNAIYHMASS
101: EHLKGVKDFL WKHGGRMDQV VSLRISEDVL AKWEKGPECL STGTKKGTEE LIGPSLKQIK DIQNEYACDS LDSFAQNNIP SFSNTASYVV MPLQNSTNGA
201: YGSISTACHG ASSSGSASHS APYGTVGLPI TPWGSAETHK LQGALSTNWF HSSGTETKGH QSTVFVNGAS QSLSCSDHML PLRVQQSHTG GNLSNGSKAN
301: VHTGAPPPWL KANEHDPKNL SLKSCGLSSR KGKLRKLNPN RVGAAWAERR RAEMEMEKQG EIVPATSDSS WLPNFGSVWQ SGTRKESRKE FEKSHKIHDT
401: KSDHDLSLEI KPYISKRMVD VVAWASLRKK PPGRAA
101: EHLKGVKDFL WKHGGRMDQV VSLRISEDVL AKWEKGPECL STGTKKGTEE LIGPSLKQIK DIQNEYACDS LDSFAQNNIP SFSNTASYVV MPLQNSTNGA
201: YGSISTACHG ASSSGSASHS APYGTVGLPI TPWGSAETHK LQGALSTNWF HSSGTETKGH QSTVFVNGAS QSLSCSDHML PLRVQQSHTG GNLSNGSKAN
301: VHTGAPPPWL KANEHDPKNL SLKSCGLSSR KGKLRKLNPN RVGAAWAERR RAEMEMEKQG EIVPATSDSS WLPNFGSVWQ SGTRKESRKE FEKSHKIHDT
401: KSDHDLSLEI KPYISKRMVD VVAWASLRKK PPGRAA
001: MKKPSKKSEI EFCTVCRFHH DQGSRHKYFP RHKSSLSSLL DRFRSKIADV RFFLKNPSVL RPQEQSQNRV WCVFCDEDIV ELGSSFACSK AINHFASSDH
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQEVSQDKKQ IDGSYNPPGV VGMTSISSSH STDAGGNVHS GAPPPWLDAN
301: DGDFSSVQLN QSDVARFQAK VPGKNRKLNP NRVGAAWAER RKIEIEMEKS GHVTKSNIDP DWLPNFGRVW QSGTRKESRK EFEKEKRKLV KTESISTESE
401: PVKIQPYISK RARRESGE
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQEVSQDKKQ IDGSYNPPGV VGMTSISSSH STDAGGNVHS GAPPPWLDAN
301: DGDFSSVQLN QSDVARFQAK VPGKNRKLNP NRVGAAWAER RKIEIEMEKS GHVTKSNIDP DWLPNFGRVW QSGTRKESRK EFEKEKRKLV KTESISTESE
401: PVKIQPYISK RARRESGE
Arabidopsis Description
TTLTITAN-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JRR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.