Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065842 | Potato | nucleus | 89.93 | 90.58 |
| VIT_17s0000g01350.t01 | Wine grape | nucleus | 48.68 | 48.56 |
| GSMUA_Achr8P17850_001 | Banana | nucleus | 25.42 | 40.93 |
| AT4G24900.1 | Thale cress | nucleus | 41.25 | 40.86 |
| KRH54182 | Soybean | cytosol | 38.37 | 40.3 |
| CDY34322 | Canola | nucleus | 37.17 | 40.05 |
| CDY03408 | Canola | nucleus | 36.69 | 39.64 |
| Bra013844.1-P | Field mustard | nucleus | 37.17 | 38.56 |
| TraesCS5D01G294200.2 | Wheat | nucleus | 35.97 | 35.46 |
| TraesCS5A01G286600.1 | Wheat | nucleus | 35.97 | 35.29 |
| Zm00001d006090_P002 | Maize | nucleus | 36.69 | 35.09 |
| HORVU5Hr1G076330.27 | Barley | extracellular, nucleus | 35.73 | 34.17 |
| OQU89749 | Sorghum | nucleus | 25.9 | 33.86 |
| TraesCS5B01G285900.2 | Wheat | nucleus | 21.1 | 32.0 |
| Zm00001d021054_P002 | Maize | mitochondrion, nucleus | 21.34 | 30.38 |
| Os09t0506900-01 | Rice | nucleus | 22.3 | 29.9 |
Protein Annotations
| EnsemblPlants:Solyc03g098330.2.1 | EnsemblPlantsGene:Solyc03g098330.2 | InterPro:CCDC84 | PANTHER:PTHR31198 | PFAM:PF14968 | SEG:seg |
| UniParc:UPI000276893C | UniProt:K4BJP8 | MapMan:35.1 | : | : | : |
Description
TITAN-like protein [Source:Projected from Arabidopsis thaliana (AT4G24900) UniProtKB/Swiss-Prot;Acc:F4JRR5]
Coordinates
chr3:+:60675148..60680878
Molecular Weight (calculated)
46948.2 Da
IEP (calculated)
9.250
GRAVY (calculated)
-0.751
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNDKQFEFC VVCKLNHNQG RRHNFIPNHK KSLAAVLSRF QSKLSDIRFF LKNPIPLRPE HASLNRLWCI FCDRDILELD SFYASDNAIR HLSCADHMKK
101: VKGFLWKYGG GMDKVDTLRI TETDFSKWEK KCNLSKKGAL DGGSRAMSIG PSNDIQNKTN SDYLNCFEKD NVHALNVDVS NSVVPLQNYT DERSQIFENK
201: MHGVTNGPNM RSTSMGVQLG EDACSSSGLS NAQKILGFHA AASHECLNGD SGTSDRRMSK GMKSSLGSPS ITQISLTFQE DSLGNVHSGA PPPWFNAVEK
301: SQLDFVSNPG RSDPFPPNQK KKSKLNPNRV GAAWAERRRV ELELESKGEL VTNTFDVNWL PNFGRVWQSG TRKESRKEFQ LENHKSSEVE SQSQSRVQLQ
401: PYVSKRKRKG PVDDELD
101: VKGFLWKYGG GMDKVDTLRI TETDFSKWEK KCNLSKKGAL DGGSRAMSIG PSNDIQNKTN SDYLNCFEKD NVHALNVDVS NSVVPLQNYT DERSQIFENK
201: MHGVTNGPNM RSTSMGVQLG EDACSSSGLS NAQKILGFHA AASHECLNGD SGTSDRRMSK GMKSSLGSPS ITQISLTFQE DSLGNVHSGA PPPWFNAVEK
301: SQLDFVSNPG RSDPFPPNQK KKSKLNPNRV GAAWAERRRV ELELESKGEL VTNTFDVNWL PNFGRVWQSG TRKESRKEFQ LENHKSSEVE SQSQSRVQLQ
401: PYVSKRKRKG PVDDELD
001: MKKPSKKSEI EFCTVCRFHH DQGSRHKYFP RHKSSLSSLL DRFRSKIADV RFFLKNPSVL RPQEQSQNRV WCVFCDEDIV ELGSSFACSK AINHFASSDH
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQENYQVSQD KKQIDGSYNP PGVVGMTSIS SSHSTDAGGN VHSGAPPPWL
301: DANDGDFSSV QLNQSDVARF QAKVPGKNRK LNPNRVGAAW AERRKIEIEM EKSGHVTKSN IDPDWLPNFG RVWQSGTRKE SRKEFEKEKR KLVKTESIST
401: ESEPVKIQPY ISKRARRESG E
101: LKNIKQFLSK NGPAMDCIDE FRISEADVAK WEKKCQSFGN EDASFEGSCG QLSGTSNDIH TKLAFETMDR IKKVPAHHIN SYKSNDVMPL QYNTNEYQIS
201: LSEIPGVIHN GSYLNMDDSQ FPLCDESGNG FGEHSIPCRS KDYSGNGNYC TQENYQVSQD KKQIDGSYNP PGVVGMTSIS SSHSTDAGGN VHSGAPPPWL
301: DANDGDFSSV QLNQSDVARF QAKVPGKNRK LNPNRVGAAW AERRKIEIEM EKSGHVTKSN IDPDWLPNFG RVWQSGTRKE SRKEFEKEKR KLVKTESIST
401: ESEPVKIQPY ISKRARRESG E
Arabidopsis Description
TTLTITAN-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JRR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.