Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G002400.5 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G23080.1 | HORVU4Hr1G002400.5 | AT1G55520.1 | 16024589 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G129900.1 | Wheat | nucleus | 78.4 | 80.93 |
| TraesCS7A01G231500.1 | Wheat | nucleus | 78.2 | 80.73 |
| TraesCS7D01G231700.1 | Wheat | nucleus | 77.71 | 80.22 |
| Os06t0489200-01 | Rice | nucleus | 61.19 | 63.62 |
| KXG19969 | Sorghum | nucleus | 56.4 | 58.05 |
| Zm00001d045954_P004 | Maize | nucleus | 55.72 | 57.63 |
| GSMUA_Achr8P03600_001 | Banana | nucleus | 40.66 | 37.58 |
| VIT_17s0000g04440.t01 | Wine grape | nucleus | 36.27 | 37.21 |
| AT5G23080.1 | Thale cress | nucleus | 33.82 | 37.2 |
| CDX87186 | Canola | nucleus | 33.63 | 36.33 |
| CDY02204 | Canola | nucleus | 32.94 | 35.81 |
| Bra035958.1-P | Field mustard | nucleus | 33.04 | 35.58 |
| CDY16838 | Canola | nucleus | 33.04 | 35.58 |
| CDY67704 | Canola | nucleus | 32.84 | 35.56 |
| Bra013015.1-P | Field mustard | nucleus | 27.66 | 35.29 |
| KRH03843 | Soybean | nucleus | 34.21 | 34.86 |
| Solyc03g114410.2.1 | Tomato | nucleus | 33.53 | 34.86 |
| KRH56717 | Soybean | nucleus | 34.21 | 34.52 |
| VIT_17s0000g04410.t01 | Wine grape | cytosol | 0.78 | 10.13 |
Protein Annotations
| Gene3D:1.10.10.790 | MapMan:16.10.2.1.4 | UniProt:A0A287WDK6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006396 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0010087 | GO:GO:0019538 | GO:GO:0030422 | GO:GO:0035196 | GO:GO:0040029 | GO:GO:0070878 |
| GO:GO:0070883 | EnsemblPlantsGene:HORVU7Hr1G047420 | EnsemblPlants:HORVU7Hr1G047420.9 | InterPro:IPR000061 | InterPro:IPR035967 | PFAM:PF01805 |
| PFscan:PS50128 | PANTHER:PTHR13384 | PANTHER:PTHR13384:SF19 | SMART:SM00648 | SUPFAM:SSF109905 | InterPro:SWAP/Surp_sf |
| InterPro:Surp | UniParc:UPI000B47D2C1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:159156019..159168774
Molecular Weight (calculated)
115852.0 Da
IEP (calculated)
10.007
GRAVY (calculated)
-0.920
Length
1023 amino acids
Sequence
(BLAST)
(BLAST)
0001: AAYRQFSVLN RRRVPAFAAS ELGLPTPRLP RPWLPTTTTR TSWSTGHRSS GRRTSPPASA APSPTQASSG PSPPGSRRSG MRKDGEDFMV HLLEASLLAS
0101: TILLAQKRDG RHRHSHLHEK VELSIKSKAY IIFLMRKISR IWEVMPWKHL NSMIHSVLQL QSMPENKHPR NKMRDHQLFL DLFLMSWWSL PQPRLGVKLL
0201: MKMGWRQGRT IKDAHADSLY ESRREARKAF LALSGVSNDE DQDQIASQKS RVDENVAESF DKISALGNTP VYVLHPKEDL HGLGFDPFKH APEFKDRKRS
0301: HKSMNRDRNR SDVSVRGSLL ISNSGQYAPG FGIGALEELG VEDEDIYASG FNYEQTEVDI EPSKTSGDSK FKLEDRKRGF FLSFKIASNS EYKLERFHPP
0401: EIPADFDGRH KFSSPIQTAD KFSDLAPPEI PPPEDTTLRL LIEGCAAMVA RCGKHIEDFY KEKSKASPQF LFLDGGDGCS YYARKLWEHQ QKFIDRQRPD
0501: AVKLKPSSDK LTAENRGTIL GERPLDRSSK SSSSFVSAKE AVQLQSNLGD TFVKPISLDG VPESKKPFRN EPAKQARFEQ FLKEKYQGGL RIANLIPTIT
0601: MSEADRARER LDFEAAADAI EKGKEYKAID PLSILGLPGL NEQRFVSSTQ LESSAVLQDE RSMYPQREEF EWRPSPILCK RFDIVDPFMG KPMPLRRPIS
0701: KMDTLMFMTE STKKINEDVR GSSTIPQNAS VAGTEETEPQ EAANNPDIVS SSMQRPVDLY KAIFSDDSDD EMDEPLNNQP VDPVKTSEGA NMALNRLVAE
0801: DFLESLGREL GLEVPPEKPA QPPNVLFRSE ILPKADASVS RNGQTSTCRE INETKGSFSL MEAANANGDG PTSNVEKLDL KYEHSADKGR SHSSHRQIRN
0901: GSPESDTSIE RHRSRKRRSH HRNRSPTPDS GSSDERRSSK KRKSYSRHRS GRSRTPDADL SSDSQKNKRK RREKRSHRTN MSDTDSSDHE YKEKYTSSSR
1001: RSSDKDRSRK HSKHRRHRRK DSA
0101: TILLAQKRDG RHRHSHLHEK VELSIKSKAY IIFLMRKISR IWEVMPWKHL NSMIHSVLQL QSMPENKHPR NKMRDHQLFL DLFLMSWWSL PQPRLGVKLL
0201: MKMGWRQGRT IKDAHADSLY ESRREARKAF LALSGVSNDE DQDQIASQKS RVDENVAESF DKISALGNTP VYVLHPKEDL HGLGFDPFKH APEFKDRKRS
0301: HKSMNRDRNR SDVSVRGSLL ISNSGQYAPG FGIGALEELG VEDEDIYASG FNYEQTEVDI EPSKTSGDSK FKLEDRKRGF FLSFKIASNS EYKLERFHPP
0401: EIPADFDGRH KFSSPIQTAD KFSDLAPPEI PPPEDTTLRL LIEGCAAMVA RCGKHIEDFY KEKSKASPQF LFLDGGDGCS YYARKLWEHQ QKFIDRQRPD
0501: AVKLKPSSDK LTAENRGTIL GERPLDRSSK SSSSFVSAKE AVQLQSNLGD TFVKPISLDG VPESKKPFRN EPAKQARFEQ FLKEKYQGGL RIANLIPTIT
0601: MSEADRARER LDFEAAADAI EKGKEYKAID PLSILGLPGL NEQRFVSSTQ LESSAVLQDE RSMYPQREEF EWRPSPILCK RFDIVDPFMG KPMPLRRPIS
0701: KMDTLMFMTE STKKINEDVR GSSTIPQNAS VAGTEETEPQ EAANNPDIVS SSMQRPVDLY KAIFSDDSDD EMDEPLNNQP VDPVKTSEGA NMALNRLVAE
0801: DFLESLGREL GLEVPPEKPA QPPNVLFRSE ILPKADASVS RNGQTSTCRE INETKGSFSL MEAANANGDG PTSNVEKLDL KYEHSADKGR SHSSHRQIRN
0901: GSPESDTSIE RHRSRKRRSH HRNRSPTPDS GSSDERRSSK KRKSYSRHRS GRSRTPDADL SSDSQKNKRK RREKRSHRTN MSDTDSSDHE YKEKYTSSSR
1001: RSSDKDRSRK HSKHRRHRRK DSA
001: MGSDEEDFVF HGTPIEREEE IASRKKKAVA GASGNLRTLP AWKQEVTDEE GRRRFHGAFT GGYSAGYYNT VGSKEGWAPQ SFTSSRQNRA GARKQSISDF
101: LDEDEKADME GKSLSASSQF DTFGFTAAEH SRKHAEKEQH ERPSAIPGPV PDELVAPVSE SIGVKLLLKM GWRRGHSIKE VRASSDARRE ARKAFLAFYT
201: DENTKETPDS LVSETEVETS LGEDIKISES TPVYVLNPKQ DLHGLGYDPF KHAPEFREKK RSRMSANKEV GFRKPLSMKE SLFGPKSGKI APGFGIGALE
301: ELDVEDEDVY AGYDFDQTYV IEDEQPARQS NDNRLRLTSK EHDVLPGFGA AKNSDYSMER FNPPIIPKDF VARHKFSGPL EAETKPTVSA PPEVPPPADN
401: NLKLLIEGFA TFVSRCGKLY EDLSREKNQS NQLFDFLREG NGHDYYARRL WEEQQKRKDQ SKLTLDVKVS PTVQKMTAET RGSLLGEKPL QRSLKETDTS
501: ASSGGSFQFP TNLSDTFTKS ASSQEAADAV KPFKDDPAKQ ERFEQFLKEK YKGGLRTTDS NRVNSMSESA RAQERLDFEA AAEAIEKGKA YKEVRRATEQ
601: PLDFLAGGLQ FTSGGTEQIK DTGVVDMKSS KTYPKREEFQ WRPSPLLCKR FDLPDPFMGK LPPAPRARNK MDSLVFLPDT VKAASARQVS ESQVPKKETS
701: IEEPEVEVEV ENVERPVDLY KAIFSDDSED DEDQPMNGKI QEGQEKKNEA AATTLNRLIA GDFLESLGKE LGFEVPMEEE IKSRSKPEDS SDKRLDRPGL
801: KEKVEEKTSS LTLGSEEEKS RKKREKSPGK RSGGNDLSSS ESSGDERRRK RYNKKDRHRN DSESDSSSDY HSRDKQGSRS RSKRRESSRE KRSSHKKHSK
901: HRRTKKSSSS RYSSDEEQKE SRREKKRRRD
101: LDEDEKADME GKSLSASSQF DTFGFTAAEH SRKHAEKEQH ERPSAIPGPV PDELVAPVSE SIGVKLLLKM GWRRGHSIKE VRASSDARRE ARKAFLAFYT
201: DENTKETPDS LVSETEVETS LGEDIKISES TPVYVLNPKQ DLHGLGYDPF KHAPEFREKK RSRMSANKEV GFRKPLSMKE SLFGPKSGKI APGFGIGALE
301: ELDVEDEDVY AGYDFDQTYV IEDEQPARQS NDNRLRLTSK EHDVLPGFGA AKNSDYSMER FNPPIIPKDF VARHKFSGPL EAETKPTVSA PPEVPPPADN
401: NLKLLIEGFA TFVSRCGKLY EDLSREKNQS NQLFDFLREG NGHDYYARRL WEEQQKRKDQ SKLTLDVKVS PTVQKMTAET RGSLLGEKPL QRSLKETDTS
501: ASSGGSFQFP TNLSDTFTKS ASSQEAADAV KPFKDDPAKQ ERFEQFLKEK YKGGLRTTDS NRVNSMSESA RAQERLDFEA AAEAIEKGKA YKEVRRATEQ
601: PLDFLAGGLQ FTSGGTEQIK DTGVVDMKSS KTYPKREEFQ WRPSPLLCKR FDLPDPFMGK LPPAPRARNK MDSLVFLPDT VKAASARQVS ESQVPKKETS
701: IEEPEVEVEV ENVERPVDLY KAIFSDDSED DEDQPMNGKI QEGQEKKNEA AATTLNRLIA GDFLESLGKE LGFEVPMEEE IKSRSKPEDS SDKRLDRPGL
801: KEKVEEKTSS LTLGSEEEKS RKKREKSPGK RSGGNDLSSS ESSGDERRRK RYNKKDRHRN DSESDSSSDY HSRDKQGSRS RSKRRESSRE KRSSHKKHSK
901: HRRTKKSSSS RYSSDEEQKE SRREKKRRRD
Arabidopsis Description
TGHG patch domain-containing protein TGH [Source:UniProtKB/Swiss-Prot;Acc:Q8GXN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.