Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES16412 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G23080.1 | EES16412 | AT1G55520.1 | 16024589 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045954_P004 | Maize | nucleus | 91.55 | 92.01 |
| Os06t0489200-01 | Rice | nucleus | 71.53 | 72.26 |
| TraesCS7B01G129900.1 | Wheat | nucleus | 70.62 | 70.84 |
| TraesCS7A01G231500.1 | Wheat | nucleus | 70.62 | 70.84 |
| TraesCS7D01G231700.1 | Wheat | nucleus | 70.42 | 70.64 |
| VIT_17s0000g04410.t01 | Wine grape | cytosol | 4.73 | 59.49 |
| HORVU7Hr1G047420.9 | Barley | mitochondrion | 58.05 | 56.4 |
| GSMUA_Achr8P03600_001 | Banana | nucleus | 51.81 | 46.52 |
| AT5G23080.1 | Thale cress | nucleus | 43.16 | 46.13 |
| VIT_17s0000g04440.t01 | Wine grape | nucleus | 46.08 | 45.94 |
| CDY02204 | Canola | nucleus | 43.06 | 45.48 |
| CDY67704 | Canola | nucleus | 43.06 | 45.29 |
| CDX87186 | Canola | nucleus | 42.86 | 44.98 |
| CDY16838 | Canola | nucleus | 42.86 | 44.84 |
| Bra035958.1-P | Field mustard | nucleus | 42.86 | 44.84 |
| Solyc03g114410.2.1 | Tomato | nucleus | 44.37 | 44.82 |
| KRH03843 | Soybean | nucleus | 42.96 | 42.53 |
| KRH56717 | Soybean | nucleus | 42.96 | 42.11 |
| Bra013015.1-P | Field mustard | nucleus | 33.9 | 42.02 |
Protein Annotations
| Gene3D:1.10.10.790 | MapMan:16.10.2.1.4 | UniProt:A0A194YJ21 | InterPro:DUF1604 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0006397 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010087 | GO:GO:0019538 | GO:GO:0030422 | GO:GO:0035196 |
| GO:GO:0040029 | GO:GO:0070878 | GO:GO:0070883 | InterPro:IPR000061 | InterPro:IPR035967 | EnsemblPlants:KXG19969 |
| ProteinID:KXG19969 | ProteinID:KXG19969.1 | PFAM:PF01805 | PFAM:PF07713 | PFscan:PS50128 | PANTHER:PTHR13384 |
| PANTHER:PTHR13384:SF19 | SMART:SM00648 | EnsemblPlantsGene:SORBI_3010G139000 | SUPFAM:SSF109905 | InterPro:SWAP/Surp_sf | InterPro:Surp |
| UniParc:UPI0007F31C0F | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:23664174..23680117
Molecular Weight (calculated)
112444.0 Da
IEP (calculated)
7.352
GRAVY (calculated)
-1.031
Length
994 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDSDDEDL VVYGTPIERE EDTSARKRRA VAEAGQLRAL PAWKQEVRDE EGRRRFHGAF TGGFSAGFYN TVGSKEGWTP QTFTSSRKNR AELTKQSIYN
101: FLDEEDIKDM GGNALETSQQ YDTFGFTAAE HARKQASKEQ KERPSAIPGP IPDELVVPTK NSIGVTLLMK MGWRQGRSVR DSHADSLYES RRNARKAFLA
201: LSGAKDDEDQ DQSAENSSLD KAVVGSVEEI PVSGNTPVYV LHPKEDFHGL GYDPFKHAPE FRDRKTLQKS KERDHKRNDA SMRGNLLISN SGHYAPGFGI
301: GALEELDAED EDIYASGFAY ERTEVDIEPS KAASDSNYKL DDRKRGFYLN FKIASNSEYK LERFLPPEIP DAFDAQHKFP TPVQSTEKFS DSAPLEVPPP
401: EDTSLTLLID GCAAMVARCG KHIEDFYKEK SKTNPQFLFL SGGDGCDYYM RKLWEHQQKH IGQQRHDSAK SKTSSDKLTA ENRGKILGER PLDRTTKLHS
501: PSLSAKDAVQ LQSNLIDTFV KPISLDGLPE SEKPFSNDLA KQVRFEQFLR DKYKGGLRAA NVTPTSTMSE ADRARERLDF EAAAEAIEKG KGKKVIDPSS
601: VFSLPGMNEQ RFVAATQPES SVVIQDEKPI YPQREQFEWR PSPILCKRFD IVDPFMGKPM PVRRPRSKME NLIFMTESNK GTKDEVESSS RSSQHASMEG
701: VADVESQGAT NDTDFEPSSL QRPVDLYKAI FSDDSGDDVD EILSNQPVDP VKTSEGANMA LNRLVAEDFL ESLGKELGLE VPPERPHVSS QPEKHLAAGA
801: SLPSQDERIT TVLTKVKENQ SYIGMVQVGN INEDIPLASA ETLGMKYEKQ ENRTEKNRSL PMHRQSQNHS PRSDSSSERH RSWKRRSHHH IRNGTPESES
901: SGERHRSRRR KKSHSRHRKG RSRSPDSDSP SDTQRERKRK EKRHRRTYTS DTDSSDHEHM ERHKSSSRRS SDKDRSRKHP IHHKHRRRDH VNYS
101: FLDEEDIKDM GGNALETSQQ YDTFGFTAAE HARKQASKEQ KERPSAIPGP IPDELVVPTK NSIGVTLLMK MGWRQGRSVR DSHADSLYES RRNARKAFLA
201: LSGAKDDEDQ DQSAENSSLD KAVVGSVEEI PVSGNTPVYV LHPKEDFHGL GYDPFKHAPE FRDRKTLQKS KERDHKRNDA SMRGNLLISN SGHYAPGFGI
301: GALEELDAED EDIYASGFAY ERTEVDIEPS KAASDSNYKL DDRKRGFYLN FKIASNSEYK LERFLPPEIP DAFDAQHKFP TPVQSTEKFS DSAPLEVPPP
401: EDTSLTLLID GCAAMVARCG KHIEDFYKEK SKTNPQFLFL SGGDGCDYYM RKLWEHQQKH IGQQRHDSAK SKTSSDKLTA ENRGKILGER PLDRTTKLHS
501: PSLSAKDAVQ LQSNLIDTFV KPISLDGLPE SEKPFSNDLA KQVRFEQFLR DKYKGGLRAA NVTPTSTMSE ADRARERLDF EAAAEAIEKG KGKKVIDPSS
601: VFSLPGMNEQ RFVAATQPES SVVIQDEKPI YPQREQFEWR PSPILCKRFD IVDPFMGKPM PVRRPRSKME NLIFMTESNK GTKDEVESSS RSSQHASMEG
701: VADVESQGAT NDTDFEPSSL QRPVDLYKAI FSDDSGDDVD EILSNQPVDP VKTSEGANMA LNRLVAEDFL ESLGKELGLE VPPERPHVSS QPEKHLAAGA
801: SLPSQDERIT TVLTKVKENQ SYIGMVQVGN INEDIPLASA ETLGMKYEKQ ENRTEKNRSL PMHRQSQNHS PRSDSSSERH RSWKRRSHHH IRNGTPESES
901: SGERHRSRRR KKSHSRHRKG RSRSPDSDSP SDTQRERKRK EKRHRRTYTS DTDSSDHEHM ERHKSSSRRS SDKDRSRKHP IHHKHRRRDH VNYS
001: MGSDEEDFVF HGTPIEREEE IASRKKKAVA GASGNLRTLP AWKQEVTDEE GRRRFHGAFT GGYSAGYYNT VGSKEGWAPQ SFTSSRQNRA GARKQSISDF
101: LDEDEKADME GKSLSASSQF DTFGFTAAEH SRKHAEKEQH ERPSAIPGPV PDELVAPVSE SIGVKLLLKM GWRRGHSIKE VRASSDARRE ARKAFLAFYT
201: DENTKETPDS LVSETEVETS LGEDIKISES TPVYVLNPKQ DLHGLGYDPF KHAPEFREKK RSRMSANKEV GFRKPLSMKE SLFGPKSGKI APGFGIGALE
301: ELDVEDEDVY AGYDFDQTYV IEDEQPARQS NDNRLRLTSK EHDVLPGFGA AKNSDYSMER FNPPIIPKDF VARHKFSGPL EAETKPTVSA PPEVPPPADN
401: NLKLLIEGFA TFVSRCGKLY EDLSREKNQS NQLFDFLREG NGHDYYARRL WEEQQKRKDQ SKLTLDVKVS PTVQKMTAET RGSLLGEKPL QRSLKETDTS
501: ASSGGSFQFP TNLSDTFTKS ASSQEAADAV KPFKDDPAKQ ERFEQFLKEK YKGGLRTTDS NRVNSMSESA RAQERLDFEA AAEAIEKGKA YKEVRRATEQ
601: PLDFLAGGLQ FTSGGTEQIK DTGVVDMKSS KTYPKREEFQ WRPSPLLCKR FDLPDPFMGK LPPAPRARNK MDSLVFLPDT VKAASARQVS ESQVPKKETS
701: IEEPEVEVEV ENVERPVDLY KAIFSDDSED DEDQPMNGKI QEGQEKKNEA AATTLNRLIA GDFLESLGKE LGFEVPMEEE IKSRSKPEDS SDKRLDRPGL
801: KEKVEEKTSS LTLGSEEEKS RKKREKSPGK RSGGNDLSSS ESSGDERRRK RYNKKDRHRN DSESDSSSDY HSRDKQGSRS RSKRRESSRE KRSSHKKHSK
901: HRRTKKSSSS RYSSDEEQKE SRREKKRRRD
101: LDEDEKADME GKSLSASSQF DTFGFTAAEH SRKHAEKEQH ERPSAIPGPV PDELVAPVSE SIGVKLLLKM GWRRGHSIKE VRASSDARRE ARKAFLAFYT
201: DENTKETPDS LVSETEVETS LGEDIKISES TPVYVLNPKQ DLHGLGYDPF KHAPEFREKK RSRMSANKEV GFRKPLSMKE SLFGPKSGKI APGFGIGALE
301: ELDVEDEDVY AGYDFDQTYV IEDEQPARQS NDNRLRLTSK EHDVLPGFGA AKNSDYSMER FNPPIIPKDF VARHKFSGPL EAETKPTVSA PPEVPPPADN
401: NLKLLIEGFA TFVSRCGKLY EDLSREKNQS NQLFDFLREG NGHDYYARRL WEEQQKRKDQ SKLTLDVKVS PTVQKMTAET RGSLLGEKPL QRSLKETDTS
501: ASSGGSFQFP TNLSDTFTKS ASSQEAADAV KPFKDDPAKQ ERFEQFLKEK YKGGLRTTDS NRVNSMSESA RAQERLDFEA AAEAIEKGKA YKEVRRATEQ
601: PLDFLAGGLQ FTSGGTEQIK DTGVVDMKSS KTYPKREEFQ WRPSPLLCKR FDLPDPFMGK LPPAPRARNK MDSLVFLPDT VKAASARQVS ESQVPKKETS
701: IEEPEVEVEV ENVERPVDLY KAIFSDDSED DEDQPMNGKI QEGQEKKNEA AATTLNRLIA GDFLESLGKE LGFEVPMEEE IKSRSKPEDS SDKRLDRPGL
801: KEKVEEKTSS LTLGSEEEKS RKKREKSPGK RSGGNDLSSS ESSGDERRRK RYNKKDRHRN DSESDSSSDY HSRDKQGSRS RSKRRESSRE KRSSHKKHSK
901: HRRTKKSSSS RYSSDEEQKE SRREKKRRRD
Arabidopsis Description
TGHG patch domain-containing protein TGH [Source:UniProtKB/Swiss-Prot;Acc:Q8GXN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.