Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d013856_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G23080.1 | Zm00001d013856_P001 | AT1G55520.1 | 16024589 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19969 | Sorghum | nucleus | 92.01 | 91.55 |
| Os06t0489200-01 | Rice | nucleus | 72.7 | 73.07 |
| TraesCS7B01G129900.1 | Wheat | nucleus | 70.37 | 70.23 |
| TraesCS7A01G231500.1 | Wheat | nucleus | 70.07 | 69.93 |
| TraesCS7D01G231700.1 | Wheat | nucleus | 69.97 | 69.83 |
| VIT_17s0000g04410.t01 | Wine grape | cytosol | 4.75 | 59.49 |
| HORVU7Hr1G047420.9 | Barley | mitochondrion | 57.63 | 55.72 |
| AT5G23080.1 | Thale cress | nucleus | 43.38 | 46.13 |
| GSMUA_Achr8P03600_001 | Banana | nucleus | 51.57 | 46.07 |
| VIT_17s0000g04440.t01 | Wine grape | nucleus | 46.01 | 45.64 |
| CDY02204 | Canola | nucleus | 42.87 | 45.06 |
| CDY67704 | Canola | nucleus | 42.97 | 44.97 |
| CDY16838 | Canola | nucleus | 43.07 | 44.84 |
| Bra035958.1-P | Field mustard | nucleus | 43.07 | 44.84 |
| Solyc03g114410.2.1 | Tomato | nucleus | 44.59 | 44.82 |
| CDX87186 | Canola | nucleus | 42.87 | 44.77 |
| KRH03843 | Soybean | nucleus | 43.58 | 42.93 |
| KRH56717 | Soybean | nucleus | 43.48 | 42.41 |
| Bra013015.1-P | Field mustard | nucleus | 33.47 | 41.27 |
Protein Annotations
| Gene3D:1.10.10.790 | EntrezGene:103638373 | MapMan:16.10.2.1.4 | ProteinID:AQL03513.1 | InterPro:DUF1604 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0006397 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010087 | GO:GO:0019538 | GO:GO:0030422 |
| GO:GO:0035196 | GO:GO:0040029 | GO:GO:0070878 | GO:GO:0070883 | InterPro:IPR000061 | InterPro:IPR035967 |
| UniProt:K7VUA0 | PFAM:PF01805 | PFAM:PF07713 | PFscan:PS50128 | PANTHER:PTHR13384 | PANTHER:PTHR13384:SF19 |
| SMART:SM00648 | SUPFAM:SSF109905 | InterPro:SWAP/Surp_sf | InterPro:Surp | UniParc:UPI000221945B | EnsemblPlantsGene:Zm00001d045954 |
| EnsemblPlants:Zm00001d045954_P004 | EnsemblPlants:Zm00001d045954_T004 | SEG:seg | : | : | : |
Description
G patch domain-containing protein TGH
Coordinates
chr9:+:49569626..49596960
Molecular Weight (calculated)
112094.0 Da
IEP (calculated)
7.292
GRAVY (calculated)
-1.013
Length
989 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDSDDEDL VVYGTPIERE EDTSARKRRA VAEAGQLRAL PAWKQEVRDE EGRRRFHGAF TGGFSAGFYN TVGSKEGWTP QTFTSSRKNR AELTKQSIYN
101: FLDEEDIKDM GGNALETSQQ YDTFGFTAAE HARKQASKEQ KERPSAIPGP IPDEFVVPTT NSIGVTLLMK MGWRQGRSIR DSHADSLYES RRNARKAFLA
201: LSGAKDGEDQ DQSAEKPSLD KAVVGSVGEI PVSGNTPVYV LHPKQDFHGL GYDPFKHAPE FRDRKTLQKS RERGRKRNDV SMRGNLLISN SGHYAPGFGI
301: GALEELDVED EDIYASGFAY EQTEVDIEPS KTANDSNYKL DDRKRGFYLS FKIASNSEYK LERFLPPEIP DDFDAQHKFP TPVQSAEMFS DSAPLEVPPP
401: EDTSLTLLID GCAAMVARCG KHIEDFYKEK SKTNPQFLFL SGGAGCNYYM RKLWEHQQKH IGQRWHDSAK SKTSSDKLTA ENRGKILGER PLDRTTKVHS
501: PSLSAKEAVQ LQSNLTETFV KPISLDGLPE YEKPFSNDPA KQVRFEQFLR DKYKGGLRAA NVTPTSTMSE GDRARERLDF EAAAEAIEKG KGKKVIDPLS
601: VFSLPGMNEQ RFVAATQPES SVVIQDEKPI YPQRQQFEWR PSPILCKRFD IVDPFMGKPM HVQRPRSKME NLIFMTESNK GTNDEVESSS RSLQHASMEA
701: LSDVESRGAA TDPDFEPSSL QRPVDLYKAI FSDDSDDDAD EILSNQLVDP VKTSEGANMA LNRLVAEDFL ESLGKELGLE VPPERPHVSS EPEKFSASRA
801: SLSSQDERIT TALTKVKENQ CSIDIVQVGN INEDTPLASA ETLGMKYENQ ENRTEKIRSR PMNRQSQNHS PRSDSSSERH RSWKRRHRHI WNGTPESESG
901: ERHRSKRKES HSRHRKRRSR SPGSDTPSDT QHETKRKEKR HRRTYTSDTD SSDHEHSERY KSSSRRSSDK DRSRKRRIHH KHRRKDHVD
101: FLDEEDIKDM GGNALETSQQ YDTFGFTAAE HARKQASKEQ KERPSAIPGP IPDEFVVPTT NSIGVTLLMK MGWRQGRSIR DSHADSLYES RRNARKAFLA
201: LSGAKDGEDQ DQSAEKPSLD KAVVGSVGEI PVSGNTPVYV LHPKQDFHGL GYDPFKHAPE FRDRKTLQKS RERGRKRNDV SMRGNLLISN SGHYAPGFGI
301: GALEELDVED EDIYASGFAY EQTEVDIEPS KTANDSNYKL DDRKRGFYLS FKIASNSEYK LERFLPPEIP DDFDAQHKFP TPVQSAEMFS DSAPLEVPPP
401: EDTSLTLLID GCAAMVARCG KHIEDFYKEK SKTNPQFLFL SGGAGCNYYM RKLWEHQQKH IGQRWHDSAK SKTSSDKLTA ENRGKILGER PLDRTTKVHS
501: PSLSAKEAVQ LQSNLTETFV KPISLDGLPE YEKPFSNDPA KQVRFEQFLR DKYKGGLRAA NVTPTSTMSE GDRARERLDF EAAAEAIEKG KGKKVIDPLS
601: VFSLPGMNEQ RFVAATQPES SVVIQDEKPI YPQRQQFEWR PSPILCKRFD IVDPFMGKPM HVQRPRSKME NLIFMTESNK GTNDEVESSS RSLQHASMEA
701: LSDVESRGAA TDPDFEPSSL QRPVDLYKAI FSDDSDDDAD EILSNQLVDP VKTSEGANMA LNRLVAEDFL ESLGKELGLE VPPERPHVSS EPEKFSASRA
801: SLSSQDERIT TALTKVKENQ CSIDIVQVGN INEDTPLASA ETLGMKYENQ ENRTEKIRSR PMNRQSQNHS PRSDSSSERH RSWKRRHRHI WNGTPESESG
901: ERHRSKRKES HSRHRKRRSR SPGSDTPSDT QHETKRKEKR HRRTYTSDTD SSDHEHSERY KSSSRRSSDK DRSRKRRIHH KHRRKDHVD
001: MGSDEEDFVF HGTPIEREEE IASRKKKAVA GASGNLRTLP AWKQEVTDEE GRRRFHGAFT GGYSAGYYNT VGSKEGWAPQ SFTSSRQNRA GARKQSISDF
101: LDEDEKADME GKSLSASSQF DTFGFTAAEH SRKHAEKEQH ERPSAIPGPV PDELVAPVSE SIGVKLLLKM GWRRGHSIKE VRASSDARRE ARKAFLAFYT
201: DENTKETPDS LVSETEVETS LGEDIKISES TPVYVLNPKQ DLHGLGYDPF KHAPEFREKK RSRMSANKEV GFRKPLSMKE SLFGPKSGKI APGFGIGALE
301: ELDVEDEDVY AGYDFDQTYV IEDEQPARQS NDNRLRLTSK EHDVLPGFGA AKNSDYSMER FNPPIIPKDF VARHKFSGPL EAETKPTVSA PPEVPPPADN
401: NLKLLIEGFA TFVSRCGKLY EDLSREKNQS NQLFDFLREG NGHDYYARRL WEEQQKRKDQ SKLTLDVKVS PTVQKMTAET RGSLLGEKPL QRSLKETDTS
501: ASSGGSFQFP TNLSDTFTKS ASSQEAADAV KPFKDDPAKQ ERFEQFLKEK YKGGLRTTDS NRVNSMSESA RAQERLDFEA AAEAIEKGKA YKEVRRATEQ
601: PLDFLAGGLQ FTSGGTEQIK DTGVVDMKSS KTYPKREEFQ WRPSPLLCKR FDLPDPFMGK LPPAPRARNK MDSLVFLPDT VKAASARQVS ESQVPKKETS
701: IEEPEVEVEV ENVERPVDLY KAIFSDDSED DEDQPMNGKI QEGQEKKNEA AATTLNRLIA GDFLESLGKE LGFEVPMEEE IKSRSKPEDS SDKRLDRPGL
801: KEKVEEKTSS LTLGSEEEKS RKKREKSPGK RSGGNDLSSS ESSGDERRRK RYNKKDRHRN DSESDSSSDY HSRDKQGSRS RSKRRESSRE KRSSHKKHSK
901: HRRTKKSSSS RYSSDEEQKE SRREKKRRRD
101: LDEDEKADME GKSLSASSQF DTFGFTAAEH SRKHAEKEQH ERPSAIPGPV PDELVAPVSE SIGVKLLLKM GWRRGHSIKE VRASSDARRE ARKAFLAFYT
201: DENTKETPDS LVSETEVETS LGEDIKISES TPVYVLNPKQ DLHGLGYDPF KHAPEFREKK RSRMSANKEV GFRKPLSMKE SLFGPKSGKI APGFGIGALE
301: ELDVEDEDVY AGYDFDQTYV IEDEQPARQS NDNRLRLTSK EHDVLPGFGA AKNSDYSMER FNPPIIPKDF VARHKFSGPL EAETKPTVSA PPEVPPPADN
401: NLKLLIEGFA TFVSRCGKLY EDLSREKNQS NQLFDFLREG NGHDYYARRL WEEQQKRKDQ SKLTLDVKVS PTVQKMTAET RGSLLGEKPL QRSLKETDTS
501: ASSGGSFQFP TNLSDTFTKS ASSQEAADAV KPFKDDPAKQ ERFEQFLKEK YKGGLRTTDS NRVNSMSESA RAQERLDFEA AAEAIEKGKA YKEVRRATEQ
601: PLDFLAGGLQ FTSGGTEQIK DTGVVDMKSS KTYPKREEFQ WRPSPLLCKR FDLPDPFMGK LPPAPRARNK MDSLVFLPDT VKAASARQVS ESQVPKKETS
701: IEEPEVEVEV ENVERPVDLY KAIFSDDSED DEDQPMNGKI QEGQEKKNEA AATTLNRLIA GDFLESLGKE LGFEVPMEEE IKSRSKPEDS SDKRLDRPGL
801: KEKVEEKTSS LTLGSEEEKS RKKREKSPGK RSGGNDLSSS ESSGDERRRK RYNKKDRHRN DSESDSSSDY HSRDKQGSRS RSKRRESSRE KRSSHKKHSK
901: HRRTKKSSSS RYSSDEEQKE SRREKKRRRD
Arabidopsis Description
TGHG patch domain-containing protein TGH [Source:UniProtKB/Swiss-Prot;Acc:Q8GXN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.