Factsheet for HORVU7Hr1G113230.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G030890.1
HORVU4Hr1G079260.2	plastid
HORVU4Hr1G079330.1	plastid

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37000.1	HORVU4Hr1G079260.2	AT3G44880.1	22366162
AT4G37000.1	HORVU4Hr1G079330.1	AT3G44880.1	22366162
AT4G37000.1	HORVU4Hr1G079260.2	AT3G44880.1	22366162
AT4G37000.1	HORVU4Hr1G079330.1	AT3G44880.1	22366162
AT4G37000.1	HORVU3Hr1G030890.1	AT4G13250.1	22366162

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0389100-01	Rice	endoplasmic reticulum	39.51	66.86
Os10t0389200-01	Rice	plasma membrane	72.38	62.92
Zm00001d030549_P001	Maize	plastid	67.83	58.43
TraesCS7D01G492300.1	Wheat	cytosol, nucleus, plastid	86.71	54.51
OQU86787	Sorghum	plastid	68.18	51.05
CDX75624	Canola	cytosol	40.21	40.93
GSMUA_Achr9P29140_001	Banana	plastid	46.15	40.0
PGSC0003DMT400048861	Potato	cytosol	37.06	38.83
VIT_07s0031g00680.t01	Wine grape	plastid	41.61	36.96
AT4G37000.1	Thale cress	plastid	39.51	35.42
KRH14207	Soybean	plastid	38.11	33.85
Solyc03g044470.2.1	Tomato	plastid	36.36	33.12
KRH73924	Soybean	plastid	37.76	32.83
Bra011734.1-P	Field mustard	plastid	39.51	23.06
CDX69273	Canola	plastid	39.86	21.67

Protein Annotations

KEGG:00860+1.3.7.12	Gene3D:3.40.1500.20	MapMan:7.12.6.7.6	UniProt:A0A287XUZ6	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005829
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009056	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009605	GO:GO:0009607	GO:GO:0009814	GO:GO:0009941
GO:GO:0009987	GO:GO:0010363	GO:GO:0015996	GO:GO:0016491	GO:GO:0043067	GO:GO:0051743
GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G113230	EnsemblPlants:HORVU7Hr1G113230.1	PFAM:PF06405	PANTHER:PTHR34685	InterPro:RCC_reductase
UniParc:UPI000B46087A	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:636567665..636568886

Molecular Weight (calculated)

30927.2 Da

IEP (calculated)

5.216

GRAVY (calculated)

-0.080

Length

286 amino acids

Sequence
(BLAST)

001: MLLRPDHGLR APPAPXGSAE PAGMPSLAHR EVARAVAEAA AARLGARLLP SAVPADVAEF RNGDGTALGS LDVRRGAPDS SIDFMLQSSL HCKVPNGAID
101: ITSLFINLNA STDAPHFIME FIQGSPTSMV VLLDLLPRKD LALHPEYIEK YYEDTEVDKQ RKIIEQLPQA RPYLSPSLFV RSAFSPTAVF FTIDCGKGGE
201: GTLEEIVHGH LASVVKGILQ IWLDTCASDA SEMEEGEREI MVKRDRTVRS KSIEVDLTAN LPRMFGPDVS GRIIAEIRKA FGVQEA

Best Arabidopsis Sequence Match ( AT4G37000.1 )
(BLAST)

001: MAMIFCNTLY SSSSPSYLSP LTSKPSRFSK NLRPRAQFQS MEDHDDHLRR KFMEFPYVSP TRKQLMVDLM STVENRLQSQ LLPCNLPPDV RNFNNPNGSA
101: EASLHIRSGD KSSPIDFVIG SWIHCKIPTG VSLNITSISG FLNSSTKAPN FVVELIQSSS KSLVLILDLP HRKDLVLNPD YLKEYYQDTA LDSHRQSLLK
201: LPEVNPYVSP SLFVRSAFSP TASMLKIDAE EEDKLEEILR DHVSPAAKEV LEVWLERCVK EEEEKIVVGE EERMELERRD KSFRRKSIED DLDLQFPRMF
301: GEEVSSRVVH AIKEAFGVL

Arabidopsis Description

RCCRRed chlorophyll catabolite reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDU4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.