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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH49190 Soybean endoplasmic reticulum 38.95 25.06
VIT_08s0007g01250.t01 Wine grape cytosol 32.28 24.66
KRH26562 Soybean plastid 32.63 24.22
KRH00055 Soybean plastid 37.54 24.04
KRH22744 Soybean plastid 31.93 23.58
KRH09563 Soybean plastid 17.19 15.31
KRH00511 Soybean endoplasmic reticulum 18.25 14.99
KRH40643 Soybean mitochondrion 18.25 14.9
KRH23903 Soybean nucleus, plastid 17.54 13.44
KRH39906 Soybean mitochondrion, plastid 17.54 13.3
KRH24069 Soybean endoplasmic reticulum, mitochondrion 16.14 12.64
KRH29040 Soybean endoplasmic reticulum 15.44 11.96
KRG88973 Soybean plastid 15.44 11.2
KRG97671 Soybean plastid 16.84 6.43
KRH44019 Soybean mitochondrion, nucleus, plastid 11.58 6.36
KRH10440 Soybean endoplasmic reticulum, nucleus, plastid 11.58 6.31
KRH31203 Soybean plastid 16.49 6.28
Protein Annotations
EMBL:ACUP02006553EnsemblPlants:KRH33749EnsemblPlantsGene:GLYMA_10G143600GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:RETICULATA-relatedPANTHER:PTHR31038PANTHER:PTHR31038:SF5PFAM:PF11891ProteinID:KRH33749ProteinID:KRH33749.1
SEG:segTMHMM:TMhelixUniParc:UPI0006ED9153UniProt:A0A0R0I1F9MapMan:35.1:
Description
hypothetical protein
Coordinates
chr10:+:37817150..37822080
Molecular Weight (calculated)
31594.0 Da
IEP (calculated)
9.475
GRAVY (calculated)
0.243
Length
285 amino acids
Sequence
(BLAST)
001: MTLGPTSLGS TLPRSQRTST VGSLILSLSP SLLASQVPLL LDAIRIWRRF CVENGIFESA GGAVTCGSLH MGEIRVGNKR ANQRHHICNE TFLIWGKDFW
101: AEFELYLIDI LVGLVVSVAL VGMLAPYARI GKPSISSGFL GRIHKAYAAL PSSVFERLRT YFYKGIMYGA DGFGCGIIGQ GIANLILTAK CQEFQVHRVI
201: FKSTPIPPNR IEHKDIRRRH TCATTCEEHK IVLEDIHVPS HDLAILVIII KLKIYSENPN LMTKKVSVWG ALKHCTGMAF FCIGW
Best Arabidopsis Sequence Match ( AT2G37860.3 )
(BLAST)
001: MAGCAMNLQF SSVVKVRNEI SSFGICNRDF VFRDLAKAMK VPVLRIRGGS GRQRSRLFVV NMSQSPIEPQ SGGFAATEQI KGEGDNSILG KDNVRNLGTD
101: QLENLDIDGN VGDGFNGSDG NGGGGGGGNG GEGDGEGEDY EEKEFGPILK FEEVMKETEA RGATLPSDML EAAKNYGIRK VLLLRYLDLQ SSAGLLGFAI
201: RSWAMLRNRM LADPSFLFKI GAEIVIDSCC ATVAEVQKRG KDFWAEFELY VADLLVGTVV NIALVGMLAP YVRFGQPSAS PGFLGRMVFA YNALPSSVFE
301: AERPGCRFSA QQRLATYFYK GIMYGAVGFG CGIVGQGIAN LIMTAKRNIN KSEENIPVPP LIKSAALWGV FLSVSSNTRY QIINGLERVV EASPFAKKFP
401: PAAMAFTVGV RLANNIYGGM QFVDWARLSG CQ
Arabidopsis Description
REProtein RETICULATA, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFK5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.