Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92821 | Soybean | nucleus | 90.06 | 91.16 |
| KRG96858 | Soybean | nucleus | 71.39 | 71.39 |
| KRH68589 | Soybean | nucleus | 70.48 | 68.22 |
| VIT_14s0128g00110.t01 | Wine grape | nucleus | 56.63 | 58.2 |
| KRH62289 | Soybean | nucleus | 48.8 | 50.0 |
| KRH53000 | Soybean | nucleus | 48.8 | 48.5 |
| KRH16792 | Soybean | nucleus | 46.99 | 48.15 |
| KRH72411 | Soybean | nucleus | 47.29 | 45.38 |
| Solyc01g098720.2.1 | Tomato | nucleus | 42.47 | 42.99 |
| PGSC0003DMT400073574 | Potato | nucleus | 43.37 | 42.73 |
| CDY65719 | Canola | nucleus | 37.35 | 41.2 |
| KRH75598 | Soybean | nucleus | 37.35 | 40.92 |
| KRH45428 | Soybean | nucleus | 37.35 | 40.92 |
| CDY41734 | Canola | nucleus | 37.05 | 40.86 |
| KRH11385 | Soybean | cytosol | 21.99 | 38.22 |
| Bra027958.1-P | Field mustard | nucleus | 33.43 | 38.01 |
| KRH20902 | Soybean | cytosol | 21.69 | 37.7 |
| KRH47774 | Soybean | nucleus | 37.65 | 32.55 |
| KRH06347 | Soybean | nucleus | 37.65 | 31.41 |
| KRH18131 | Soybean | nucleus | 26.51 | 26.19 |
| KRH16521 | Soybean | nucleus | 25.9 | 25.98 |
| KRH64504 | Soybean | nucleus | 25.9 | 25.0 |
| KRH53438 | Soybean | nucleus | 26.2 | 24.93 |
| KRH75571 | Soybean | nucleus | 31.93 | 24.71 |
| KRH71094 | Soybean | nucleus | 31.33 | 23.32 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02006567 | EnsemblPlantsGene:GLYMA_10G156600 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1LBE5 | InterPro:IPR011598 | InterPro:IPR036638 |
| EnsemblPlants:KRH33976 | ProteinID:KRH33976 | ProteinID:KRH33976.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 |
| PANTHER:PTHR11969:SF26 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000233CACE | InterPro:bHLH_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:+:39102744..39104687
Molecular Weight (calculated)
36926.4 Da
IEP (calculated)
5.286
GRAVY (calculated)
-0.578
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLPEGERDR ERAMALEAVV FPQSQDPFGS GYGSVNTKDF YNYTLLAATY EQQHINKEEE QGGASISTFQ PETSNYPYGD WTTSSSSSML PHLNNELQET
101: TTTTSNTLDS LNTRPKRRRA KSRKNKEEIE NQRMTHIVVE RNRRKQMNEY LSVLRSLMPD SYIQRGDQAS IIGGAVNFVK ELEQRLHFLG AQKEGEGKSD
201: DGGATNMPFS EFFTFPQYST GGGGGSDNSA AIGEDVSEVK CGIADIEVTM VESHANLKIR SKKCPKQLLK LVSGLHTVRL TILHLNVTTT GEVVLYSLSV
301: KVEDDCKLGS VDDIAAAVYQ MLDRIQQEAM LN
101: TTTTSNTLDS LNTRPKRRRA KSRKNKEEIE NQRMTHIVVE RNRRKQMNEY LSVLRSLMPD SYIQRGDQAS IIGGAVNFVK ELEQRLHFLG AQKEGEGKSD
201: DGGATNMPFS EFFTFPQYST GGGGGSDNSA AIGEDVSEVK CGIADIEVTM VESHANLKIR SKKCPKQLLK LVSGLHTVRL TILHLNVTTT GEVVLYSLSV
301: KVEDDCKLGS VDDIAAAVYQ MLDRIQQEAM LN
001: MPLEAVVYPQ DPFGYLSNCK DFMFHDLYSQ EEFVAQDTKN NIDKLGHEQS FVEQGKEDDH QWRDYHQYPL LIPSLGEELG LTAIDVESHP PPQHRRKRRR
101: TRNCKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP SSYAQRGDQA SIVGGAINYV KELEHILQSM EPKRTRTHDP KGDKTSTSSL VGPFTDFFSF
201: PQYSTKSSSD VPESSSSPAE IEVTVAESHA NIKIMTKKKP RQLLKLITSL QSLRLTLLHL NVTTLHNSIL YSISVRVEEG SQLNTVDDIA TALNQTIRRI
301: QEET
101: TRNCKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP SSYAQRGDQA SIVGGAINYV KELEHILQSM EPKRTRTHDP KGDKTSTSSL VGPFTDFFSF
201: PQYSTKSSSD VPESSSSPAE IEVTVAESHA NIKIMTKKKP RQLLKLITSL QSLRLTLLHL NVTTLHNSIL YSISVRVEEG SQLNTVDDIA TALNQTIRRI
301: QEET
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT1G22490]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.