Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45428 | Soybean | nucleus | 90.76 | 90.76 |
| HORVU2Hr1G106030.2 | Barley | cytosol, mitochondrion, nucleus | 21.78 | 64.08 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 66.34 | 63.81 |
| Solyc08g076820.2.1 | Tomato | nucleus | 62.38 | 57.62 |
| PGSC0003DMT400045210 | Potato | nucleus | 62.05 | 56.97 |
| GSMUA_Achr11P... | Banana | mitochondrion | 34.98 | 56.08 |
| GSMUA_Achr11P... | Banana | nucleus | 46.86 | 47.33 |
| Bra025007.1-P | Field mustard | nucleus | 41.58 | 45.99 |
| CDY63053 | Canola | nucleus | 47.19 | 44.14 |
| CDX77682 | Canola | nucleus | 47.19 | 44.14 |
| AT5G46690.1 | Thale cress | nucleus | 46.86 | 43.43 |
| CDY03201 | Canola | cytosol | 25.74 | 43.09 |
| TraesCS2A01G448800.1 | Wheat | nucleus | 45.54 | 41.69 |
| TraesCS2B01G469700.1 | Wheat | nucleus | 44.88 | 41.59 |
| TraesCS2B01G469800.1 | Wheat | nucleus | 44.88 | 41.59 |
| KRH62289 | Soybean | nucleus | 44.22 | 41.36 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 44.55 | 40.79 |
| TraesCS6B01G291200.1 | Wheat | nucleus | 45.21 | 40.77 |
| KRH16792 | Soybean | nucleus | 43.56 | 40.74 |
| Bra017533.1-P | Field mustard | nucleus | 38.61 | 40.48 |
| TraesCS6A01G264200.1 | Wheat | nucleus | 44.88 | 40.48 |
| KRH53000 | Soybean | nucleus | 43.89 | 39.82 |
| TraesCS6D01G250700.1 | Wheat | nucleus | 45.54 | 39.77 |
| KRG96858 | Soybean | nucleus | 43.23 | 39.46 |
| HORVU6Hr1G067000.2 | Barley | nucleus | 44.88 | 39.19 |
| CDY35175 | Canola | nucleus | 37.95 | 39.12 |
| EES07423 | Sorghum | nucleus | 44.22 | 38.4 |
| KRH68589 | Soybean | nucleus | 43.23 | 38.19 |
| KRH72411 | Soybean | nucleus | 43.23 | 37.86 |
| Zm00001d026046_P001 | Maize | nucleus | 41.91 | 37.8 |
| KRG92821 | Soybean | nucleus | 40.59 | 37.5 |
| KRH33976 | Soybean | nucleus | 40.92 | 37.35 |
| Zm00001d051509_P001 | Maize | nucleus | 40.26 | 36.75 |
| KXG27015 | Sorghum | cytosol | 41.58 | 36.73 |
| Os02t0691500-01 | Rice | nucleus | 44.88 | 36.46 |
| KRH11385 | Soybean | cytosol | 22.77 | 36.13 |
| Zm00001d017677_P001 | Maize | nucleus | 43.56 | 36.07 |
| Zm00001d002492_P001 | Maize | mitochondrion | 20.79 | 35.8 |
| KRH20902 | Soybean | cytosol | 22.44 | 35.6 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 33.99 | 29.77 |
| KRH47774 | Soybean | nucleus | 37.62 | 29.69 |
| KRH06347 | Soybean | nucleus | 36.96 | 28.14 |
| KRH18131 | Soybean | nucleus | 27.72 | 25.0 |
| KRH16521 | Soybean | nucleus | 27.06 | 24.77 |
| KRH75571 | Soybean | nucleus | 34.65 | 24.48 |
| KRH64504 | Soybean | nucleus | 27.39 | 24.13 |
| KRH53438 | Soybean | nucleus | 27.39 | 23.78 |
| KRH71094 | Soybean | nucleus | 33.66 | 22.87 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02000405 | ncoils:Coil | EnsemblPlantsGene:GLYMA_01G095500 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1KDQ1 | InterPro:IPR011598 |
| InterPro:IPR036638 | EnsemblPlants:KRH75598 | ProteinID:KRH75598 | ProteinID:KRH75598.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF31 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002339BBB | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:29735075..29737470
Molecular Weight (calculated)
34214.8 Da
IEP (calculated)
8.034
GRAVY (calculated)
-0.364
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MALETLASNE FSNFIIYDTI SATPFSSHGS PEASFLESLV NYQEHDPAFD NSALRTRNHQ AGEQESVGRR QNVVGVQVQG RKKRRRKPRV CKNKEEAETQ
101: RITHITVERN RRKQMNEHLV VLRSLMPESY VQRGDQASIV GGAIEFVKEL EHLLQSLEAR KLQLLHQEVV QANENTAISK LMQPPFAQFF SYPQYTWSQT
201: PNKYTSKTKA AIADIEVTLI ETHANLRILT RRNSPGQLTK LVAGFQTLCL TVLHLNVTTI DPLVFYSISA KVEEGFQLCS VDGIATAIHH LLARIEEEAS
301: LCS
101: RITHITVERN RRKQMNEHLV VLRSLMPESY VQRGDQASIV GGAIEFVKEL EHLLQSLEAR KLQLLHQEVV QANENTAISK LMQPPFAQFF SYPQYTWSQT
201: PNKYTSKTKA AIADIEVTLI ETHANLRILT RRNSPGQLTK LVAGFQTLCL TVLHLNVTTI DPLVFYSISA KVEEGFQLCS VDGIATAIHH LLARIEEEAS
301: LCS
001: MTLEALSSNG LLNFLLSETL SPTPFKSLVD LEPLPENDVI ISKNTISEIS NQEPPPQRQP PATNRGKKRR RRKPRVCKNE EEAENQRMTH IAVERNRRRQ
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
Arabidopsis Description
BHLH71Transcription factor bHLH71 [Source:UniProtKB/Swiss-Prot;Acc:Q56XR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.