Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017533.1-P | Field mustard | nucleus | 92.52 | 94.12 |
| CDY03201 | Canola | cytosol | 54.76 | 88.95 |
| CDY63053 | Canola | nucleus | 76.19 | 69.14 |
| CDX77682 | Canola | nucleus | 76.19 | 69.14 |
| AT5G46690.1 | Thale cress | nucleus | 74.15 | 66.67 |
| HORVU2Hr1G106030.2 | Barley | cytosol, mitochondrion, nucleus | 19.05 | 54.37 |
| GSMUA_Achr11P... | Banana | mitochondrion | 29.93 | 46.56 |
| Solyc08g076820.2.1 | Tomato | nucleus | 42.86 | 38.41 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 41.16 | 38.41 |
| PGSC0003DMT400045210 | Potato | nucleus | 42.86 | 38.18 |
| KRH45428 | Soybean | nucleus | 39.12 | 37.95 |
| KRH75598 | Soybean | nucleus | 39.12 | 37.95 |
| CDY37634 | Canola | nucleus | 29.25 | 37.72 |
| GSMUA_Achr11P... | Banana | nucleus | 36.73 | 36.0 |
| CDY46652 | Canola | nucleus | 33.33 | 34.75 |
| CDY12528 | Canola | nucleus | 33.33 | 34.75 |
| CDX91680 | Canola | nucleus | 32.99 | 33.92 |
| CDY41479 | Canola | nucleus | 32.99 | 33.92 |
| CDY21365 | Canola | nucleus | 33.33 | 32.56 |
| CDY04811 | Canola | nucleus | 32.99 | 32.23 |
| TraesCS2B01G469700.1 | Wheat | nucleus | 35.71 | 32.11 |
| TraesCS2B01G469800.1 | Wheat | nucleus | 35.71 | 32.11 |
| TraesCS2A01G448800.1 | Wheat | nucleus | 35.71 | 31.72 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 35.71 | 31.72 |
| CDX96382 | Canola | nucleus | 34.35 | 31.08 |
| Zm00001d051509_P001 | Maize | nucleus | 34.69 | 30.72 |
| CDY65719 | Canola | nucleus | 31.29 | 30.56 |
| CDY41734 | Canola | nucleus | 31.29 | 30.56 |
| CDX82171 | Canola | nucleus | 33.33 | 30.06 |
| TraesCS6A01G264200.1 | Wheat | nucleus | 34.35 | 30.06 |
| TraesCS6B01G291200.1 | Wheat | nucleus | 34.01 | 29.76 |
| CDY03650 | Canola | nucleus | 32.99 | 29.75 |
| TraesCS6D01G250700.1 | Wheat | nucleus | 35.03 | 29.68 |
| CDX68274 | Canola | nucleus | 32.31 | 29.32 |
| CDY50447 | Canola | nucleus | 32.31 | 29.32 |
| CDX72877 | Canola | nucleus | 32.65 | 29.27 |
| EES07423 | Sorghum | nucleus | 34.69 | 29.23 |
| Zm00001d026046_P001 | Maize | nucleus | 32.99 | 28.87 |
| CDY51710 | Canola | nucleus | 30.27 | 28.62 |
| KXG27015 | Sorghum | cytosol | 33.33 | 28.57 |
| HORVU6Hr1G067000.2 | Barley | nucleus | 33.67 | 28.53 |
| CDY37820 | Canola | nucleus | 21.09 | 28.44 |
| CDY07143 | Canola | nucleus | 29.59 | 28.06 |
| CDY11386 | Canola | nucleus | 26.53 | 27.96 |
| Zm00001d002492_P001 | Maize | mitochondrion | 16.67 | 27.84 |
| CDY18843 | Canola | nucleus | 18.71 | 27.36 |
| CDY24717 | Canola | nucleus | 18.71 | 27.36 |
| Os02t0691500-01 | Rice | nucleus | 34.35 | 27.08 |
| Zm00001d017677_P001 | Maize | nucleus | 33.33 | 26.78 |
| CDY41561 | Canola | nucleus | 28.23 | 26.6 |
| CDY08066 | Canola | nucleus | 18.71 | 26.57 |
| CDY58338 | Canola | nucleus | 18.71 | 26.57 |
| CDY33966 | Canola | nucleus | 27.21 | 26.49 |
| CDY05233 | Canola | nucleus | 18.37 | 26.47 |
| CDY27521 | Canola | nucleus | 27.21 | 25.81 |
| CDY48013 | Canola | nucleus | 27.55 | 25.47 |
| CDX76598 | Canola | nucleus | 27.21 | 25.4 |
| CDX80049 | Canola | nucleus | 26.87 | 25.24 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 28.57 | 24.28 |
| CDX77460 | Canola | nucleus | 28.57 | 23.6 |
| CDY68483 | Canola | nucleus | 25.51 | 23.44 |
| CDY55926 | Canola | nucleus | 25.17 | 22.91 |
| CDX85167 | Canola | nucleus | 29.59 | 22.36 |
| CDX92996 | Canola | nucleus | 30.27 | 21.98 |
| CDX94841 | Canola | nucleus | 30.27 | 21.81 |
| CDY18083 | Canola | nucleus | 27.21 | 20.83 |
| CDY19692 | Canola | nucleus | 24.83 | 20.68 |
| CDY47059 | Canola | nucleus | 24.49 | 20.63 |
| CDY14397 | Canola | nucleus | 24.83 | 20.56 |
| CDY64587 | Canola | nucleus | 25.85 | 20.49 |
| CDY55929 | Canola | nucleus | 22.79 | 20.06 |
| CDX96201 | Canola | nucleus | 23.81 | 19.89 |
| CDY38734 | Canola | nucleus | 23.81 | 19.83 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078H9Q5 | UniProt:A0A078H9Q5 | EnsemblPlants:CDY35175 | ProteinID:CDY35175 |
| ProteinID:CDY35175.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00058070001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF31 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EDDD66 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g18120DBnaA09g18120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9Q5]
Coordinates
chrLK032347:+:284112..285826
Molecular Weight (calculated)
32905.2 Da
IEP (calculated)
8.845
GRAVY (calculated)
-0.463
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLEALSSNG LLNFVLSETL SPTSENDIID LEPPLENDII VSKNTVPVIS HQEPSSRQLP PARSGKKRKW RKPRVCKNEE EAENQRITHI AVERNRRRQM
101: NQHLSALRSL MPQPFAQKGD QASIVGGAID FIKELEQQLL SLEAQKLQKA QTNQTVSSST SQESYGEQEN GHKPCSLSLS HFFLHSYDPS QENKVGTTSS
201: VRTAMEDLEV TLIETHANIK ILSRRRGFRW ITVATTGPPQ LSKLMAALES LSLSVLHLSV TTLDTFAIYS ISTKDTCNGI RARQHIMKAW AFGF
101: NQHLSALRSL MPQPFAQKGD QASIVGGAID FIKELEQQLL SLEAQKLQKA QTNQTVSSST SQESYGEQEN GHKPCSLSLS HFFLHSYDPS QENKVGTTSS
201: VRTAMEDLEV TLIETHANIK ILSRRRGFRW ITVATTGPPQ LSKLMAALES LSLSVLHLSV TTLDTFAIYS ISTKDTCNGI RARQHIMKAW AFGF
001: MTLEALSSNG LLNFLLSETL SPTPFKSLVD LEPLPENDVI ISKNTISEIS NQEPPPQRQP PATNRGKKRR RRKPRVCKNE EEAENQRMTH IAVERNRRRQ
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVIKLK PYHLNRTKPD
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVIKLK PYHLNRTKPD
Arabidopsis Description
BHLH71Transcription factor bHLH71 [Source:UniProtKB/Swiss-Prot;Acc:Q56XR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.