Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040234.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| AT3G06120.1 | Thale cress | nucleus | 93.03 | 92.57 |
| CDY58338 | Canola | nucleus | 94.03 | 91.3 |
| CDY08066 | Canola | nucleus | 94.03 | 91.3 |
| CDY24717 | Canola | nucleus | 89.55 | 89.55 |
| CDY05233 | Canola | nucleus | 88.56 | 87.25 |
| VIT_05s0020g02700.t01 | Wine grape | nucleus | 64.68 | 68.42 |
| KRH20902 | Soybean | cytosol | 63.68 | 67.02 |
| KRH11385 | Soybean | cytosol | 63.18 | 66.49 |
| Solyc01g080050.2.1 | Tomato | nucleus | 62.19 | 64.1 |
| GSMUA_Achr7P21110_001 | Banana | nucleus | 60.7 | 63.54 |
| GSMUA_Achr7P21190_001 | Banana | nucleus | 60.7 | 61.62 |
| Zm00001d009778_P001 | Maize | nucleus | 57.21 | 52.51 |
| KXG22733 | Sorghum | nucleus | 57.21 | 48.32 |
| TraesCS2A01G120700.1 | Wheat | nucleus | 50.75 | 47.22 |
| TraesCS2D01G122800.1 | Wheat | nucleus | 50.25 | 46.98 |
| Os05t0597000-00 | Rice | nucleus | 52.24 | 46.26 |
| HORVU2Hr1G020990.1 | Barley | nucleus | 50.75 | 42.86 |
| TraesCS2B01G141600.1 | Wheat | plastid | 50.75 | 42.86 |
| CDY19692 | Canola | nucleus | 48.26 | 27.48 |
| CDY14397 | Canola | nucleus | 48.26 | 27.32 |
| CDY47059 | Canola | nucleus | 46.27 | 26.65 |
| CDY38734 | Canola | nucleus | 46.77 | 26.63 |
| CDY11386 | Canola | nucleus | 34.83 | 25.09 |
| CDY37634 | Canola | nucleus | 27.86 | 24.56 |
| CDX96201 | Canola | nucleus | 42.79 | 24.43 |
| CDY51710 | Canola | nucleus | 36.82 | 23.79 |
| CDY07143 | Canola | nucleus | 35.32 | 22.9 |
| CDY03201 | Canola | cytosol | 20.4 | 22.65 |
| CDX76598 | Canola | nucleus | 35.32 | 22.54 |
| CDX80049 | Canola | nucleus | 34.83 | 22.36 |
| CDY48013 | Canola | nucleus | 34.33 | 21.7 |
| CDX77460 | Canola | nucleus | 38.31 | 21.63 |
| CDY68483 | Canola | nucleus | 34.33 | 21.56 |
| CDY41561 | Canola | nucleus | 33.33 | 21.47 |
| CDX85167 | Canola | nucleus | 41.29 | 21.34 |
| CDY27521 | Canola | nucleus | 32.84 | 21.29 |
| CDY55926 | Canola | nucleus | 33.83 | 21.05 |
| CDX92996 | Canola | nucleus | 40.8 | 20.25 |
| CDY37820 | Canola | nucleus | 21.89 | 20.18 |
| CDX94841 | Canola | nucleus | 40.8 | 20.1 |
| CDY64587 | Canola | nucleus | 35.32 | 19.14 |
| CDY18083 | Canola | nucleus | 36.32 | 19.01 |
| CDY41734 | Canola | nucleus | 28.36 | 18.94 |
| CDY65719 | Canola | nucleus | 28.36 | 18.94 |
| CDY35175 | Canola | nucleus | 27.36 | 18.71 |
| CDY63053 | Canola | nucleus | 29.85 | 18.52 |
| CDY46652 | Canola | nucleus | 25.87 | 18.44 |
| CDX77682 | Canola | nucleus | 29.35 | 18.21 |
| CDX91680 | Canola | nucleus | 25.87 | 18.18 |
| CDY41479 | Canola | nucleus | 25.87 | 18.18 |
| CDY12528 | Canola | nucleus | 25.37 | 18.09 |
| CDY55929 | Canola | nucleus | 29.85 | 17.96 |
| CDY04811 | Canola | nucleus | 26.87 | 17.94 |
| CDY21365 | Canola | nucleus | 26.87 | 17.94 |
| CDY33966 | Canola | nucleus | 26.37 | 17.55 |
| CDX72877 | Canola | nucleus | 27.86 | 17.07 |
| CDX96382 | Canola | nucleus | 27.36 | 16.92 |
| CDY50447 | Canola | nucleus | 26.37 | 16.36 |
| CDX68274 | Canola | nucleus | 26.37 | 16.36 |
| CDX82171 | Canola | nucleus | 26.37 | 16.26 |
| CDY03650 | Canola | nucleus | 26.37 | 16.26 |
Protein Annotations
| EnsemblPlants:CDY18843 | EnsemblPlantsGene:GSBRNA2T00006019001 | Gene3D:4.10.280.10 | GO:A0A078G2F4 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR45509 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:CDY18843 | ProteinID:CDY18843.1 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002544CE0 | UniProt:A0A078G2F4 | MapMan:15.5.32 | : |
Description
BnaAnng03080DBnaAnng03080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2F4]
Coordinates
chrLK032089:+:521435..522915
Molecular Weight (calculated)
22835.9 Da
IEP (calculated)
9.338
GRAVY (calculated)
-0.028
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKEMQ QLVQVLESKK RRKTLNRPSF LHDHQTLEPS ILAAATTRVP FSQIENVMTT
101: STFKEVGSCC NSPHANVEAK ISGSNVVLRV VSRRIEGQLV RIISVLEKLS FPVLHLNISS MEETVLYFFV VKIGLECHIS LEELTFEVQK SFVPEVIVST
201: N
101: STFKEVGSCC NSPHANVEAK ISGSNVVLRV VSRRIEGQLV RIISVLEKLS FPVLHLNISS MEETVLYFFV VKIGLECHIS LEELTFEVQK SFVPEVIVST
201: N
001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN
Arabidopsis Description
MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.