Factsheet for Bra040234.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18843	Canola	nucleus	100.0	100.0
AT3G06120.1	Thale cress	nucleus	93.03	92.57
Bra001183.1-P	Field mustard	nucleus	94.03	91.3
Bra020775.1-P	Field mustard	nucleus	89.55	89.55
VIT_05s0020g02700.t01	Wine grape	nucleus	64.68	68.42
KRH20902	Soybean	cytosol	63.68	67.02
KRH11385	Soybean	cytosol	63.18	66.49
Solyc01g080050.2.1	Tomato	nucleus	62.19	64.1
GSMUA_Achr7P21110_001	Banana	nucleus	60.7	63.54
GSMUA_Achr7P21190_001	Banana	nucleus	60.7	61.62
Zm00001d009778_P001	Maize	nucleus	57.21	52.51
KXG22733	Sorghum	nucleus	57.21	48.32
TraesCS2A01G120700.1	Wheat	nucleus	50.75	47.22
TraesCS2D01G122800.1	Wheat	nucleus	50.25	46.98
Os05t0597000-00	Rice	nucleus	52.24	46.26
TraesCS2B01G141600.1	Wheat	plastid	50.75	42.86
HORVU2Hr1G020990.1	Barley	nucleus	50.75	42.86
Bra004505.1-P	Field mustard	nucleus	34.83	25.83
Bra007644.1-P	Field mustard	nucleus	34.83	25.09
Bra029088.1-P	Field mustard	nucleus	41.79	25.0
Bra040856.1-P	Field mustard	nucleus	26.87	24.88
Bra022638.1-P	Field mustard	nucleus	42.29	24.29
Bra037414.1-P	Field mustard	nucleus	36.82	23.79
Bra040483.1-P	Field mustard	nucleus	34.33	21.7
Bra003073.1-P	Field mustard	nucleus	45.27	21.02
Bra031865.1-P	Field mustard	nucleus	22.39	20.64
Bra028357.1-P	Field mustard	nucleus	40.8	20.5
Bra028351.1-P	Field mustard	nucleus	36.32	20.28
Bra001929.1-P	Field mustard	nucleus	40.8	20.25
Bra025007.1-P	Field mustard	nucleus	27.36	20.07
Bra027958.1-P	Field mustard	nucleus	28.86	19.86
Bra017533.1-P	Field mustard	nucleus	27.36	19.03
Bra012329.1-P	Field mustard	nucleus	26.37	17.49
Bra016377.1-P	Field mustard	nucleus	25.87	17.22
Bra016080.1-P	Field mustard	nucleus	27.36	16.92
Bra008017.1-P	Field mustard	nucleus	26.87	16.56
Bra003886.1-P	Field mustard	nucleus	26.37	16.36

Protein Annotations

EnsemblPlants:Bra040234.1	EnsemblPlants:Bra040234.1-P	EnsemblPlantsGene:Bra040234	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
ncoils:Coil	PANTHER:PTHR45509	PFAM:PF00010	PFscan:PS50888	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI0002544CE0	UniProt:M4FGK6	MapMan:15.5.32	:	:	:

Description

AT3G06120 (E=5e-100) MUTE | MUTE (MUTE); DNA binding / transcription factor

Coordinates

chrA01:-:28250758..28252046

Molecular Weight (calculated)

22835.9 Da

IEP (calculated)

9.338

GRAVY (calculated)

-0.028

Length

201 amino acids

Sequence
(BLAST)

001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKEMQ QLVQVLESKK RRKTLNRPSF LHDHQTLEPS ILAAATTRVP FSQIENVMTT
101: STFKEVGSCC NSPHANVEAK ISGSNVVLRV VSRRIEGQLV RIISVLEKLS FPVLHLNISS MEETVLYFFV VKIGLECHIS LEELTFEVQK SFVPEVIVST
201: N

Best Arabidopsis Sequence Match ( AT3G06120.1 )
(BLAST)

001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN

Arabidopsis Description

MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.