Factsheet for Bra020775.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24717	Canola	nucleus	100.0	100.0
AT3G06120.1	Thale cress	nucleus	90.05	89.6
Bra040234.1-P	Field mustard	nucleus	89.55	89.55
Bra001183.1-P	Field mustard	nucleus	90.55	87.92
VIT_05s0020g02700.t01	Wine grape	nucleus	64.68	68.42
KRH20902	Soybean	cytosol	63.18	66.49
KRH11385	Soybean	cytosol	62.69	65.97
Solyc01g080050.2.1	Tomato	nucleus	61.69	63.59
GSMUA_Achr7P21110_001	Banana	nucleus	60.2	63.02
GSMUA_Achr7P21190_001	Banana	nucleus	60.2	61.11
Zm00001d009778_P001	Maize	nucleus	56.22	51.6
KXG22733	Sorghum	nucleus	56.22	47.48
Os05t0597000-00	Rice	nucleus	51.24	45.37
TraesCS2A01G120700.1	Wheat	nucleus	48.76	45.37
TraesCS2D01G122800.1	Wheat	nucleus	48.26	45.12
HORVU2Hr1G020990.1	Barley	nucleus	49.75	42.02
TraesCS2B01G141600.1	Wheat	plastid	48.76	41.18
Bra040856.1-P	Field mustard	nucleus	28.36	26.27
Bra007644.1-P	Field mustard	nucleus	35.82	25.81
Bra029088.1-P	Field mustard	nucleus	42.29	25.3
Bra004505.1-P	Field mustard	nucleus	33.83	25.09
Bra022638.1-P	Field mustard	nucleus	42.29	24.29
Bra037414.1-P	Field mustard	nucleus	36.32	23.47
Bra040483.1-P	Field mustard	nucleus	34.33	21.7
Bra003073.1-P	Field mustard	nucleus	46.27	21.48
Bra031865.1-P	Field mustard	nucleus	22.89	21.1
Bra028357.1-P	Field mustard	nucleus	41.79	21.0
Bra001929.1-P	Field mustard	nucleus	41.79	20.74
Bra028351.1-P	Field mustard	nucleus	36.32	20.28
Bra025007.1-P	Field mustard	nucleus	27.36	20.07
Bra027958.1-P	Field mustard	nucleus	28.86	19.86
Bra017533.1-P	Field mustard	nucleus	26.37	18.34
Bra016377.1-P	Field mustard	nucleus	27.36	18.21
Bra016080.1-P	Field mustard	nucleus	29.35	18.15
Bra012329.1-P	Field mustard	nucleus	26.87	17.82
Bra003886.1-P	Field mustard	nucleus	28.36	17.59
Bra008017.1-P	Field mustard	nucleus	28.36	17.48

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EnsemblPlantsGene:Bra020775	EnsemblPlants:Bra020775.1	EnsemblPlants:Bra020775.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	UniProt:M4DW81	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR45509	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002545D90	InterPro:bHLH_dom	:	:	:

Description

AT3G06120 (E=2e-094) MUTE | MUTE (MUTE); DNA binding / transcription factor

Coordinates

chrA02:+:23176908..23178050

Molecular Weight (calculated)

22795.8 Da

IEP (calculated)

8.954

GRAVY (calculated)

-0.111

Length

201 amino acids

Sequence
(BLAST)

001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKEMQ QLVQVLESKK RRKTLNRPSS PYDHQTVEPS ILAATPNATT RMPFSQIENV
101: MTTSTFKEVG ACSNSHHANV EAKISGSNVV LRVVSWRNEG QLVKIISVLE KLSFQVLHLN ISCMEESVLY FFVVKIGLEC HLSLEELTLE VQKSFVPEAI
201: V

Best Arabidopsis Sequence Match ( AT3G06120.1 )
(BLAST)

001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN

Arabidopsis Description

MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.