Factsheet for Bra040483.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48013	Canola	nucleus	100.0	100.0
Bra004505.1-P	Field mustard	nucleus	62.26	73.06
AT2G46810.1	Thale cress	nucleus	72.33	61.99
Bra007644.1-P	Field mustard	nucleus	43.4	49.46
Bra040856.1-P	Field mustard	nucleus	28.3	41.47
Bra037414.1-P	Field mustard	nucleus	36.48	37.3
VIT_15s0048g02510.t01	Wine grape	nucleus	41.82	36.84
GSMUA_Achr5P20300_001	Banana	nucleus	33.65	36.64
GSMUA_Achr11P...	Banana	nucleus	32.39	36.14
KRH47774	Soybean	nucleus	41.82	34.64
Bra020775.1-P	Field mustard	nucleus	21.7	34.33
Bra040234.1-P	Field mustard	nucleus	21.7	34.33
Bra001183.1-P	Field mustard	nucleus	22.01	33.82
KRH06347	Soybean	nucleus	41.51	33.17
GSMUA_Achr11P...	Banana	nucleus	33.96	32.73
Os03t0122100-00	Rice	mitochondrion, nucleus, plastid	31.76	32.48
Zm00001d027419_P001	Maize	nucleus	31.45	32.15
Bra016377.1-P	Field mustard	nucleus	30.5	32.12
TraesCS4B01G347100.1	Wheat	extracellular	30.19	32.0
HORVU4Hr1G084850.2	Barley	extracellular	30.19	31.68
TraesCS5A01G515800.1	Wheat	extracellular	30.19	31.68
TraesCS4D01G342000.1	Wheat	extracellular	29.56	31.02
OQU93358	Sorghum	nucleus	31.45	30.96
Zm00001d048478_P001	Maize	nucleus	31.45	30.86
Bra012329.1-P	Field mustard	nucleus	28.93	30.36
Bra008017.1-P	Field mustard	nucleus	30.19	29.45
GSMUA_Achr8P12330_001	Banana	golgi, vacuole	33.65	29.23
Bra016080.1-P	Field mustard	nucleus	29.87	29.23
Bra031865.1-P	Field mustard	nucleus	19.81	28.9
Bra003886.1-P	Field mustard	nucleus	29.25	28.7
Bra025007.1-P	Field mustard	nucleus	24.53	28.47
Bra017533.1-P	Field mustard	nucleus	25.47	28.03
Bra027958.1-P	Field mustard	nucleus	23.9	26.03
Bra001929.1-P	Field mustard	nucleus	27.67	21.73
Bra028357.1-P	Field mustard	nucleus	27.04	21.5
Bra028351.1-P	Field mustard	nucleus	22.64	20.0
Bra029088.1-P	Field mustard	nucleus	20.13	19.05
Bra022638.1-P	Field mustard	nucleus	20.13	18.29
Bra003073.1-P	Field mustard	nucleus	21.07	15.47

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EnsemblPlantsGene:Bra040483	EnsemblPlants:Bra040483.1	EnsemblPlants:Bra040483.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
UniProt:M4FHA5	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR11969	PANTHER:PTHR11969:SF29	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002544816	InterPro:bHLH_dom	SEG:seg	:	:

Description

AT2G46810 (E=3e-070) | basic helix-loop-helix (bHLH) family protein

Coordinates

chrA04:+:18903958..18905279

Molecular Weight (calculated)

36732.8 Da

IEP (calculated)

8.229

GRAVY (calculated)

-0.556

Length

318 amino acids

Sequence
(BLAST)

001: MWTCIFTPSP NELHSVLVDL LDQKVNVRRS LQVQASPEDH SFPLEEDQYS TLTLQGTRLP FQQMLQDPSS VLSFKDPHIL GNYLPYEVPE FHSPFHSDNN
101: HYYQNPFLEG TNEDISSQEL QLNPVDNAFS RRKLRNNNLA ASVSREKRKR RRSKPMKNRE EMESQKRMTH IAVERNRRRQ MNVHLNSLRS LIPSSYFLRG
201: DQASIVGGAI DFVKILEQHL QSLEAQKITQ QTSKLIIDAT VTERHVSLKI QYCQRKQGQL LRSIFLLEKL GLTVLHLNVT SPCNASVSYS FNLKMEEDCN
301: LGSVDEITAA VRQIFDYC

Best Arabidopsis Sequence Match ( AT2G46810.3 )
(BLAST)

001: MERSIQGQNK LCCLDQKVNV RRSLQVQETV EDHQSFALEE EEQQLSTPSL LQDTTIPFLQ MLQQSEDPSP FLSFKDPSFL ALLSLQTLEK PWELENYLPH
101: EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS
201: LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG
301: QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS

Arabidopsis Description

BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.