Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P20300_001 | Banana | nucleus | 65.61 | 64.04 |
| GSMUA_Achr11P... | Banana | nucleus | 74.04 | 63.94 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 73.68 | 57.38 |
| GSMUA_Achr11P... | Banana | mitochondrion | 30.18 | 45.5 |
| GSMUA_Achr10P... | Banana | mitochondrion | 30.88 | 44.44 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 27.72 | 42.47 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 29.12 | 41.71 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 45.26 | 41.48 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 42.46 | 40.33 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 42.81 | 40.26 |
| Zm00001d027419_P001 | Maize | nucleus | 43.86 | 40.19 |
| OQU93358 | Sorghum | nucleus | 45.26 | 39.94 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 42.11 | 39.6 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 42.11 | 39.6 |
| Zm00001d048478_P001 | Maize | nucleus | 43.86 | 38.58 |
| GSMUA_Achr8P28400_001 | Banana | nucleus | 26.67 | 38.19 |
| GSMUA_Achr7P21110_001 | Banana | nucleus | 25.61 | 38.02 |
| CDY51710 | Canola | nucleus | 40.7 | 37.3 |
| Bra037414.1-P | Field mustard | nucleus | 40.7 | 37.3 |
| CDY11386 | Canola | nucleus | 36.49 | 37.28 |
| Bra004505.1-P | Field mustard | nucleus | 35.44 | 37.27 |
| GSMUA_Achr7P21190_001 | Banana | nucleus | 25.61 | 36.87 |
| CDY07143 | Canola | nucleus | 40.0 | 36.77 |
| Bra007644.1-P | Field mustard | nucleus | 35.79 | 36.56 |
| AT4G01460.2 | Thale cress | nucleus | 40.35 | 36.51 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 45.96 | 36.29 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 29.82 | 35.12 |
| KRH47774 | Soybean | nucleus | 46.32 | 34.38 |
| CDY27521 | Canola | nucleus | 36.49 | 33.55 |
| KRH06347 | Soybean | nucleus | 46.32 | 33.17 |
| CDX76598 | Canola | nucleus | 36.14 | 32.7 |
| Bra040483.1-P | Field mustard | nucleus | 36.14 | 32.39 |
| CDY48013 | Canola | nucleus | 36.14 | 32.39 |
| CDY41561 | Canola | nucleus | 35.44 | 32.37 |
| GSMUA_Achr11P... | Banana | nucleus | 33.68 | 32.0 |
| CDX80049 | Canola | nucleus | 35.09 | 31.95 |
| GSMUA_Achr5P17900_001 | Banana | nucleus | 31.23 | 31.56 |
| AT2G46810.1 | Thale cress | nucleus | 40.35 | 31.0 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 30.88 | 30.24 |
| GSMUA_Achr8P17650_001 | Banana | nucleus | 31.23 | 30.07 |
| CDY68483 | Canola | nucleus | 33.68 | 30.0 |
| CDY55926 | Canola | nucleus | 33.33 | 29.41 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 29.47 | 29.27 |
| GSMUA_Achr2P06030_001 | Banana | nucleus | 32.63 | 29.15 |
| GSMUA_Achr10P... | Banana | nucleus | 31.58 | 29.13 |
| AT3G61950.1 | Thale cress | nucleus | 36.49 | 29.05 |
| GSMUA_Achr6P02150_001 | Banana | nucleus | 32.98 | 27.25 |
| CDY55929 | Canola | nucleus | 31.93 | 27.25 |
| GSMUA_Achr7P12790_001 | Banana | nucleus | 31.23 | 27.22 |
| GSMUA_Achr10P... | Banana | nucleus | 23.51 | 25.67 |
| GSMUA_Achr5P06780_001 | Banana | cytosol | 25.26 | 25.44 |
| GSMUA_Achr8P19870_001 | Banana | cytosol, golgi, nucleus | 25.96 | 23.79 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P21440_001 | EnsemblPlants:GSMUA_Achr11T21440_001 | EnsemblPlantsGene:GSMUA_Achr11G21440_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF29 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI00029505DB | UniProt:M0RU74 | MapMan:15.5.32 | : | : |
Description
Putative Predicted protein (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr11G21440_001]
Coordinates
chr11:+:22069912..22071149
Molecular Weight (calculated)
32403.6 Da
IEP (calculated)
6.835
GRAVY (calculated)
-0.484
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCGSLSSHQ TPVLRLLQGA MQAGEEMVEE EVQLHLQQYQ HRRFFTSYPQ ETNFQLLRRM QSQCHFRQLR MAEMDRSCAV EQLESCVTHV SEKRQRPASA
101: SKSAEEAESQ RMTHIAVERN RRHLMNVHLA TLRSLMPPSF VQRGDQASII GGAIEFVKEL EQHLLSLRAQ KRFRESAFAR SSSDDDDPCQ EAHQEDWTGV
201: DVEATLVQGH VNLKVAGRRQ RGQLVRAIAA MEELRLSILH LNITSLGPSS ILYSLNLKME EECKLGTADE IATAVHQIFS YNSNC
101: SKSAEEAESQ RMTHIAVERN RRHLMNVHLA TLRSLMPPSF VQRGDQASII GGAIEFVKEL EQHLLSLRAQ KRFRESAFAR SSSDDDDPCQ EAHQEDWTGV
201: DVEATLVQGH VNLKVAGRRQ RGQLVRAIAA MEELRLSILH LNITSLGPSS ILYSLNLKME EECKLGTADE IATAVHQIFS YNSNC
001: MLQQSEDPSP FLSFKDPSFL ALLSLQTLEK PWELENYLPH EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE
101: KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN
201: ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS
101: KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN
201: ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS
Arabidopsis Description
BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.