Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68483 | Canola | nucleus | 94.43 | 95.31 |
| CDY55929 | Canola | nucleus | 92.88 | 89.82 |
| CDX76598 | Canola | nucleus | 68.42 | 70.16 |
| CDY11386 | Canola | nucleus | 60.06 | 69.53 |
| AT3G61950.1 | Thale cress | nucleus | 73.06 | 65.92 |
| CDY41561 | Canola | nucleus | 47.37 | 49.04 |
| CDX80049 | Canola | nucleus | 47.06 | 48.56 |
| CDY27521 | Canola | nucleus | 45.82 | 47.74 |
| CDY48013 | Canola | nucleus | 44.58 | 45.28 |
| CDY51710 | Canola | nucleus | 39.63 | 41.16 |
| CDY07143 | Canola | nucleus | 39.32 | 40.97 |
| CDY37634 | Canola | nucleus | 25.39 | 35.96 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 39.94 | 35.73 |
| KRH47774 | Soybean | nucleus | 42.11 | 35.42 |
| KRH06347 | Soybean | nucleus | 41.8 | 33.92 |
| CDY24717 | Canola | nucleus | 21.05 | 33.83 |
| CDY18843 | Canola | nucleus | 21.05 | 33.83 |
| CDY05233 | Canola | nucleus | 21.36 | 33.82 |
| CDY41479 | Canola | nucleus | 29.72 | 33.57 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 31.27 | 33.33 |
| GSMUA_Achr11P... | Banana | nucleus | 29.41 | 33.33 |
| CDY08066 | Canola | nucleus | 21.36 | 33.33 |
| CDY58338 | Canola | nucleus | 21.36 | 33.33 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 30.96 | 33.33 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 31.27 | 33.33 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 31.27 | 33.33 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 30.03 | 33.22 |
| CDX91680 | Canola | nucleus | 28.48 | 32.17 |
| GSMUA_Achr11P... | Banana | nucleus | 32.2 | 31.52 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 30.34 | 31.51 |
| Zm00001d048478_P001 | Maize | nucleus | 31.27 | 31.17 |
| CDY04811 | Canola | nucleus | 28.79 | 30.9 |
| Zm00001d027419_P001 | Maize | nucleus | 29.72 | 30.87 |
| CDY12528 | Canola | nucleus | 26.93 | 30.85 |
| CDY21365 | Canola | nucleus | 28.17 | 30.23 |
| OQU93358 | Sorghum | nucleus | 29.72 | 29.72 |
| CDY46652 | Canola | nucleus | 25.7 | 29.43 |
| CDX68274 | Canola | nucleus | 29.41 | 29.32 |
| CDY50447 | Canola | nucleus | 29.41 | 29.32 |
| CDX96382 | Canola | nucleus | 28.79 | 28.62 |
| CDY37820 | Canola | nucleus | 19.2 | 28.44 |
| CDX72877 | Canola | nucleus | 28.48 | 28.05 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 31.58 | 27.87 |
| CDX82171 | Canola | nucleus | 27.86 | 27.61 |
| CDY03650 | Canola | nucleus | 27.55 | 27.3 |
| CDY65719 | Canola | nucleus | 25.08 | 26.91 |
| CDY41734 | Canola | nucleus | 24.77 | 26.58 |
| CDX77682 | Canola | nucleus | 25.7 | 25.62 |
| CDY63053 | Canola | nucleus | 25.7 | 25.62 |
| CDY35175 | Canola | nucleus | 22.91 | 25.17 |
| CDY33966 | Canola | nucleus | 23.53 | 25.17 |
| CDY03201 | Canola | cytosol | 13.93 | 24.86 |
| CDX77460 | Canola | nucleus | 25.39 | 23.03 |
| CDX85167 | Canola | nucleus | 26.93 | 22.36 |
| CDX92996 | Canola | nucleus | 26.32 | 20.99 |
| CDX94841 | Canola | nucleus | 26.32 | 20.83 |
| CDY19692 | Canola | nucleus | 22.29 | 20.4 |
| CDY14397 | Canola | nucleus | 22.29 | 20.28 |
| CDY47059 | Canola | nucleus | 21.67 | 20.06 |
| CDY38734 | Canola | nucleus | 21.36 | 19.55 |
| CDX96201 | Canola | nucleus | 20.12 | 18.47 |
| CDY18083 | Canola | nucleus | 21.05 | 17.71 |
| CDY64587 | Canola | nucleus | 20.12 | 17.52 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078J1M2 | UniProt:A0A078J1M2 | EnsemblPlants:CDY55926 | ProteinID:CDY55926 |
| ProteinID:CDY55926.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00017525001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF29 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EF0382 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng29550DBnaCnng29550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1M2]
Coordinates
chrLK033440:+:17957..19509
Molecular Weight (calculated)
37282.5 Da
IEP (calculated)
6.851
GRAVY (calculated)
-0.630
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MESFQGHINP CFLDRKADTR SLEVQGFKEA QSFAFKEEEE ESMQDTVPFL QMLQSEEPSF LRLLSLQNLK EPWEVESFLS QEGHPHFYQN QVSALYIEGA
101: KQALSSQEAD MILLHSSSPQ HKRKNNDLLA PDMTREKRKR RKTKPSKNIE EIESQRISHI VVERNRRRQM NEHVNSLRSL LPPSYIQRGD QASIVGGAIN
201: YAKVLEQIIQ SLESQKKTQQ SSEVENRVQE DETCVPSIET TVIQNHVNLR VVCRKRQGGL IRGIISLEKL RLTVLHLNIS TLSRFYVSCC FNLKMEDGCE
301: LESADEIKKV AHQIFDMPMN LNN
101: KQALSSQEAD MILLHSSSPQ HKRKNNDLLA PDMTREKRKR RKTKPSKNIE EIESQRISHI VVERNRRRQM NEHVNSLRSL LPPSYIQRGD QASIVGGAIN
201: YAKVLEQIIQ SLESQKKTQQ SSEVENRVQE DETCVPSIET TVIQNHVNLR VVCRKRQGGL IRGIISLEKL RLTVLHLNIS TLSRFYVSCC FNLKMEDGCE
301: LESADEIKKV AHQIFDMPMN LNN
001: MERFQGHINP CFFDRKPDVR SLEVQGFAEA QSFAFKEKEE ESLQDTVPFL QMLQSEDPSS FFSIKEPNFL TLLSLQTLKE PWELERYLSL EDSQFHSPVQ
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
Arabidopsis Description
BHLH67Transcription factor bHLH67 [Source:UniProtKB/Swiss-Prot;Acc:Q700E4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.