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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031865.1-P Field mustard nucleus 98.62 98.62
CDY33966 Canola nucleus 87.61 63.24
AT5G65320.1 Thale cress nucleus 68.81 50.68
CDY37634 Canola nucleus 36.24 34.65
GSMUA_Achr3P06660_001 Banana mitochondrion, nucleus 28.9 33.87
PGSC0003DMT400041644 Potato nucleus 36.7 33.76
GSMUA_Achr9P15000_001 Banana mitochondrion 29.82 32.66
GSMUA_Achr2P22310_001 Banana nucleus 35.78 32.23
Solyc11g010340.1.1 Tomato nucleus 42.2 30.87
GSMUA_Achr10P... Banana mitochondrion 27.98 30.81
VIT_07s0191g00240.t01 Wine grape nucleus 44.95 30.43
CDY41479 Canola nucleus 39.45 30.07
CDX91680 Canola nucleus 38.53 29.37
GSMUA_Achr5P17900_001 Banana nucleus 37.61 29.08
Zm00001d031260_P001 Maize nucleus 28.44 28.7
GSMUA_Achr6P10290_001 Banana nucleus 37.61 28.18
GSMUA_Achr5P05450_001 Banana nucleus 35.78 27.18
CDY21365 Canola nucleus 37.16 26.91
CDY04811 Canola nucleus 36.7 26.58
TraesCS4B01G304500.1 Wheat nucleus 37.61 26.54
CDX96382 Canola nucleus 39.45 26.46
TraesCS4A01G404700.1 Wheat nucleus 37.61 26.45
TraesCS4D01G302700.1 Wheat nucleus 37.61 26.45
Os02t0759000-01 Rice cytosol 18.35 26.32
CDX72877 Canola nucleus 38.99 25.91
GSMUA_Achr10P... Banana nucleus 36.7 25.89
CDY12528 Canola nucleus 33.49 25.89
GSMUA_Achr8P17650_001 Banana nucleus 34.86 25.68
TraesCS6A01G315700.1 Wheat nucleus 35.78 25.41
CDX68274 Canola nucleus 37.61 25.31
CDY50447 Canola nucleus 37.61 25.31
Os03t0188400-01 Rice nucleus 38.07 25.23
CDY46652 Canola nucleus 32.57 25.18
Zm00001d020790_P001 Maize nucleus 38.07 25.0
EER96894 Sorghum nucleus 38.53 24.85
CDX82171 Canola nucleus 36.7 24.54
CDY03650 Canola nucleus 36.7 24.54
GSMUA_Achr7P12790_001 Banana nucleus 36.7 24.46
TraesCS6B01G346100.1 Wheat nucleus 35.78 24.45
TraesCS6D01G294900.1 Wheat nucleus 35.78 24.45
OQU91887 Sorghum nucleus 36.24 24.38
GSMUA_Achr6P02150_001 Banana nucleus 38.53 24.35
Zm00001d027987_P001 Maize nucleus 36.7 24.17
Zm00001d005939_P001 Maize nucleus 36.7 24.02
Os09t0468700-00 Rice nucleus 38.53 23.93
Os10t0376900-01 Rice nucleus 35.78 23.78
Os08t0483900-01 Rice nucleus 39.45 23.69
Zm00001d018119_P001 Maize nucleus 38.07 23.58
TraesCS5B01G245900.1 Wheat nucleus 37.16 23.55
TraesCS5D01G255100.1 Wheat nucleus 36.24 23.51
TraesCS5A01G248200.1 Wheat nucleus 37.16 23.48
CDX77682 Canola nucleus 34.86 23.46
KXG30709 Sorghum nucleus 37.61 23.43
TraesCS6B01G366200.1 Wheat nucleus 37.16 23.41
TraesCS6D01G315200.1 Wheat nucleus 36.7 23.39
TraesCS6A01G335500.1 Wheat nucleus 37.61 23.36
CDY11386 Canola nucleus 29.82 23.3
CDY63053 Canola nucleus 34.4 23.15
EER95359 Sorghum nucleus 37.61 22.97
Zm00001d048229_P001 Maize nucleus 37.16 22.69
CDY24717 Canola nucleus 20.64 22.39
CDY51710 Canola nucleus 31.65 22.19
CDY05233 Canola nucleus 20.64 22.06
CDY18843 Canola nucleus 20.18 21.89
Zm00001d052192_P001 Maize nucleus 34.4 21.74
HORVU6Hr1G081120.4 Barley nucleus 33.95 21.39
CDY07143 Canola nucleus 30.28 21.29
CDY65719 Canola nucleus 29.36 21.26
CDY35175 Canola nucleus 28.44 21.09
CDY03201 Canola cytosol 17.43 20.99
CDY27521 Canola nucleus 29.82 20.97
CDX76598 Canola nucleus 30.28 20.95
CDY41734 Canola nucleus 28.9 20.93
CDY41561 Canola nucleus 29.82 20.83
CDY58338 Canola nucleus 19.72 20.77
CDY08066 Canola nucleus 19.72 20.77
CDX80049 Canola nucleus 29.82 20.77
CDY48013 Canola nucleus 29.36 20.13
CDY68483 Canola nucleus 28.44 19.38
CDY55926 Canola nucleus 28.44 19.2
HORVU4Hr1G078270.2 Barley plastid 37.61 18.55
CDY55929 Canola nucleus 26.15 17.07
HORVU5Hr1G070000.3 Barley nucleus, plastid 35.78 16.53
CDX85167 Canola nucleus 29.36 16.45
CDY19692 Canola nucleus 26.61 16.43
CDY14397 Canola nucleus 26.15 16.06
CDX94841 Canola nucleus 29.82 15.93
CDY38734 Canola nucleus 25.69 15.86
CDX92996 Canola nucleus 29.36 15.8
CDY47059 Canola nucleus 25.23 15.76
CDX96201 Canola nucleus 24.77 15.34
CDX77460 Canola nucleus 24.77 15.17
CDY18083 Canola nucleus 22.48 12.76
CDY64587 Canola nucleus 21.1 12.4
Protein Annotations
MapMan:15.5.32Gene3D:4.10.280.10GO:A0A078HHH7UniProt:A0A078HHH7EnsemblPlants:CDY37820ProteinID:CDY37820
ProteinID:CDY37820.1ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0046983
EnsemblPlantsGene:GSBRNA2T00064763001InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638PFAM:PF00010PFscan:PS50888
PANTHER:PTHR11969PANTHER:PTHR11969:SF49SMART:SM00353SUPFAM:SSF47459UniParc:UPI0004EF17E9InterPro:bHLH_dom
SEG:seg:::::
Description
BnaAnng04810DBnaAnng04810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHH7]
Coordinates
chrLK032409:-:56945..58512
Molecular Weight (calculated)
25289.0 Da
IEP (calculated)
9.324
GRAVY (calculated)
-0.792
Length
218 amino acids
Sequence
(BLAST)
001: MMSQQEYPYD FSLMKTSSIY EVLDYSIAEQ HSHPTENLSS LQAQGGFSQE PPRKKRKRRR TRSEQKIEEK ENQRMNHIAV ERNRRRQMNH FLSILKAMMP
101: LSYSRRSDQA SIIEGTINYL KKQEQLLQSF EAQLKPTKPN QSINILSNFF NFPQYSTATA CASSRHHHNG LAVVANVEVT MVEMHANIKV DEDCRLTTTA
201: NEIADAVHEV VSRIHKEH
Best Arabidopsis Sequence Match ( AT5G65320.1 )
(BLAST)
001: MMFQQDYPHG FSLVETSLSY EMLDYFQNIV VSNSEDVASQ QNSISSSSYS SATLSCSITE QKSHLTEKLS PLRERYGCGD FLSRKRRRRS EKTIVDKENQ
101: RMNHIAVERN RRKQMNHFLS ILKSMMPLSY SQPNDQASII EGTISYLKKL EQRLQSLEAQ LKATKLNQSP NIFSDFFMFP QYSTATATAT ATASSSSSSH
201: HHHKRLEVVA DVEVTMVERH ANIKVLTKTQ PRLLFKIINE FNSLGLSTLH LNLTTSKDMS LFTFSVKVEA DCQLTPSGNE VANTVHEVVR RVHKER
Arabidopsis Description
BHLH99Transcription factor bHLH99 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.