Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra031865.1-P | Field mustard | nucleus | 98.62 | 98.62 |
CDY33966 | Canola | nucleus | 87.61 | 63.24 |
AT5G65320.1 | Thale cress | nucleus | 68.81 | 50.68 |
CDY37634 | Canola | nucleus | 36.24 | 34.65 |
GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 28.9 | 33.87 |
PGSC0003DMT400041644 | Potato | nucleus | 36.7 | 33.76 |
GSMUA_Achr9P15000_001 | Banana | mitochondrion | 29.82 | 32.66 |
GSMUA_Achr2P22310_001 | Banana | nucleus | 35.78 | 32.23 |
Solyc11g010340.1.1 | Tomato | nucleus | 42.2 | 30.87 |
GSMUA_Achr10P... | Banana | mitochondrion | 27.98 | 30.81 |
VIT_07s0191g00240.t01 | Wine grape | nucleus | 44.95 | 30.43 |
CDY41479 | Canola | nucleus | 39.45 | 30.07 |
CDX91680 | Canola | nucleus | 38.53 | 29.37 |
GSMUA_Achr5P17900_001 | Banana | nucleus | 37.61 | 29.08 |
Zm00001d031260_P001 | Maize | nucleus | 28.44 | 28.7 |
GSMUA_Achr6P10290_001 | Banana | nucleus | 37.61 | 28.18 |
GSMUA_Achr5P05450_001 | Banana | nucleus | 35.78 | 27.18 |
CDY21365 | Canola | nucleus | 37.16 | 26.91 |
CDY04811 | Canola | nucleus | 36.7 | 26.58 |
TraesCS4B01G304500.1 | Wheat | nucleus | 37.61 | 26.54 |
CDX96382 | Canola | nucleus | 39.45 | 26.46 |
TraesCS4A01G404700.1 | Wheat | nucleus | 37.61 | 26.45 |
TraesCS4D01G302700.1 | Wheat | nucleus | 37.61 | 26.45 |
Os02t0759000-01 | Rice | cytosol | 18.35 | 26.32 |
CDX72877 | Canola | nucleus | 38.99 | 25.91 |
GSMUA_Achr10P... | Banana | nucleus | 36.7 | 25.89 |
CDY12528 | Canola | nucleus | 33.49 | 25.89 |
GSMUA_Achr8P17650_001 | Banana | nucleus | 34.86 | 25.68 |
TraesCS6A01G315700.1 | Wheat | nucleus | 35.78 | 25.41 |
CDX68274 | Canola | nucleus | 37.61 | 25.31 |
CDY50447 | Canola | nucleus | 37.61 | 25.31 |
Os03t0188400-01 | Rice | nucleus | 38.07 | 25.23 |
CDY46652 | Canola | nucleus | 32.57 | 25.18 |
Zm00001d020790_P001 | Maize | nucleus | 38.07 | 25.0 |
EER96894 | Sorghum | nucleus | 38.53 | 24.85 |
CDX82171 | Canola | nucleus | 36.7 | 24.54 |
CDY03650 | Canola | nucleus | 36.7 | 24.54 |
GSMUA_Achr7P12790_001 | Banana | nucleus | 36.7 | 24.46 |
TraesCS6B01G346100.1 | Wheat | nucleus | 35.78 | 24.45 |
TraesCS6D01G294900.1 | Wheat | nucleus | 35.78 | 24.45 |
OQU91887 | Sorghum | nucleus | 36.24 | 24.38 |
GSMUA_Achr6P02150_001 | Banana | nucleus | 38.53 | 24.35 |
Zm00001d027987_P001 | Maize | nucleus | 36.7 | 24.17 |
Zm00001d005939_P001 | Maize | nucleus | 36.7 | 24.02 |
Os09t0468700-00 | Rice | nucleus | 38.53 | 23.93 |
Os10t0376900-01 | Rice | nucleus | 35.78 | 23.78 |
Os08t0483900-01 | Rice | nucleus | 39.45 | 23.69 |
Zm00001d018119_P001 | Maize | nucleus | 38.07 | 23.58 |
TraesCS5B01G245900.1 | Wheat | nucleus | 37.16 | 23.55 |
TraesCS5D01G255100.1 | Wheat | nucleus | 36.24 | 23.51 |
TraesCS5A01G248200.1 | Wheat | nucleus | 37.16 | 23.48 |
CDX77682 | Canola | nucleus | 34.86 | 23.46 |
KXG30709 | Sorghum | nucleus | 37.61 | 23.43 |
TraesCS6B01G366200.1 | Wheat | nucleus | 37.16 | 23.41 |
TraesCS6D01G315200.1 | Wheat | nucleus | 36.7 | 23.39 |
TraesCS6A01G335500.1 | Wheat | nucleus | 37.61 | 23.36 |
CDY11386 | Canola | nucleus | 29.82 | 23.3 |
CDY63053 | Canola | nucleus | 34.4 | 23.15 |
EER95359 | Sorghum | nucleus | 37.61 | 22.97 |
Zm00001d048229_P001 | Maize | nucleus | 37.16 | 22.69 |
CDY24717 | Canola | nucleus | 20.64 | 22.39 |
CDY51710 | Canola | nucleus | 31.65 | 22.19 |
CDY05233 | Canola | nucleus | 20.64 | 22.06 |
CDY18843 | Canola | nucleus | 20.18 | 21.89 |
Zm00001d052192_P001 | Maize | nucleus | 34.4 | 21.74 |
HORVU6Hr1G081120.4 | Barley | nucleus | 33.95 | 21.39 |
CDY07143 | Canola | nucleus | 30.28 | 21.29 |
CDY65719 | Canola | nucleus | 29.36 | 21.26 |
CDY35175 | Canola | nucleus | 28.44 | 21.09 |
CDY03201 | Canola | cytosol | 17.43 | 20.99 |
CDY27521 | Canola | nucleus | 29.82 | 20.97 |
CDX76598 | Canola | nucleus | 30.28 | 20.95 |
CDY41734 | Canola | nucleus | 28.9 | 20.93 |
CDY41561 | Canola | nucleus | 29.82 | 20.83 |
CDY58338 | Canola | nucleus | 19.72 | 20.77 |
CDY08066 | Canola | nucleus | 19.72 | 20.77 |
CDX80049 | Canola | nucleus | 29.82 | 20.77 |
CDY48013 | Canola | nucleus | 29.36 | 20.13 |
CDY68483 | Canola | nucleus | 28.44 | 19.38 |
CDY55926 | Canola | nucleus | 28.44 | 19.2 |
HORVU4Hr1G078270.2 | Barley | plastid | 37.61 | 18.55 |
CDY55929 | Canola | nucleus | 26.15 | 17.07 |
HORVU5Hr1G070000.3 | Barley | nucleus, plastid | 35.78 | 16.53 |
CDX85167 | Canola | nucleus | 29.36 | 16.45 |
CDY19692 | Canola | nucleus | 26.61 | 16.43 |
CDY14397 | Canola | nucleus | 26.15 | 16.06 |
CDX94841 | Canola | nucleus | 29.82 | 15.93 |
CDY38734 | Canola | nucleus | 25.69 | 15.86 |
CDX92996 | Canola | nucleus | 29.36 | 15.8 |
CDY47059 | Canola | nucleus | 25.23 | 15.76 |
CDX96201 | Canola | nucleus | 24.77 | 15.34 |
CDX77460 | Canola | nucleus | 24.77 | 15.17 |
CDY18083 | Canola | nucleus | 22.48 | 12.76 |
CDY64587 | Canola | nucleus | 21.1 | 12.4 |
Protein Annotations
MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078HHH7 | UniProt:A0A078HHH7 | EnsemblPlants:CDY37820 | ProteinID:CDY37820 |
ProteinID:CDY37820.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
EnsemblPlantsGene:GSBRNA2T00064763001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
PANTHER:PTHR11969 | PANTHER:PTHR11969:SF49 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EF17E9 | InterPro:bHLH_dom |
SEG:seg | : | : | : | : | : |
Description
BnaAnng04810DBnaAnng04810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHH7]
Coordinates
chrLK032409:-:56945..58512
Molecular Weight (calculated)
25289.0 Da
IEP (calculated)
9.324
GRAVY (calculated)
-0.792
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSQQEYPYD FSLMKTSSIY EVLDYSIAEQ HSHPTENLSS LQAQGGFSQE PPRKKRKRRR TRSEQKIEEK ENQRMNHIAV ERNRRRQMNH FLSILKAMMP
101: LSYSRRSDQA SIIEGTINYL KKQEQLLQSF EAQLKPTKPN QSINILSNFF NFPQYSTATA CASSRHHHNG LAVVANVEVT MVEMHANIKV DEDCRLTTTA
201: NEIADAVHEV VSRIHKEH
101: LSYSRRSDQA SIIEGTINYL KKQEQLLQSF EAQLKPTKPN QSINILSNFF NFPQYSTATA CASSRHHHNG LAVVANVEVT MVEMHANIKV DEDCRLTTTA
201: NEIADAVHEV VSRIHKEH
001: MMFQQDYPHG FSLVETSLSY EMLDYFQNIV VSNSEDVASQ QNSISSSSYS SATLSCSITE QKSHLTEKLS PLRERYGCGD FLSRKRRRRS EKTIVDKENQ
101: RMNHIAVERN RRKQMNHFLS ILKSMMPLSY SQPNDQASII EGTISYLKKL EQRLQSLEAQ LKATKLNQSP NIFSDFFMFP QYSTATATAT ATASSSSSSH
201: HHHKRLEVVA DVEVTMVERH ANIKVLTKTQ PRLLFKIINE FNSLGLSTLH LNLTTSKDMS LFTFSVKVEA DCQLTPSGNE VANTVHEVVR RVHKER
101: RMNHIAVERN RRKQMNHFLS ILKSMMPLSY SQPNDQASII EGTISYLKKL EQRLQSLEAQ LKATKLNQSP NIFSDFFMFP QYSTATATAT ATASSSSSSH
201: HHHKRLEVVA DVEVTMVERH ANIKVLTKTQ PRLLFKIINE FNSLGLSTLH LNLTTSKDMS LFTFSVKVEA DCQLTPSGNE VANTVHEVVR RVHKER
Arabidopsis Description
BHLH99Transcription factor bHLH99 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.