Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37820 | Canola | nucleus | 50.68 | 68.81 |
| Bra031865.1-P | Field mustard | nucleus | 50.34 | 68.35 |
| CDY33966 | Canola | nucleus | 66.89 | 65.56 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 29.39 | 46.77 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 29.05 | 43.22 |
| GSMUA_Achr10P... | Banana | mitochondrion | 26.35 | 39.39 |
| Solyc11g010340.1.1 | Tomato | nucleus | 39.19 | 38.93 |
| Os02t0759000-01 | Rice | cytosol | 19.59 | 38.16 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 31.08 | 38.02 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 40.88 | 37.58 |
| GSMUA_Achr5P17900_001 | Banana | nucleus | 35.47 | 37.23 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 35.81 | 36.43 |
| PGSC0003DMT400041644 | Potato | nucleus | 29.05 | 36.29 |
| Zm00001d031260_P001 | Maize | nucleus | 26.01 | 35.65 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 33.11 | 34.15 |
| AT1G72210.1 | Thale cress | nucleus | 36.49 | 33.75 |
| GSMUA_Achr10P... | Banana | nucleus | 35.14 | 33.66 |
| GSMUA_Achr7P12790_001 | Banana | nucleus | 35.81 | 32.42 |
| TraesCS4A01G404700.1 | Wheat | nucleus | 33.78 | 32.26 |
| GSMUA_Achr8P17650_001 | Banana | nucleus | 32.09 | 32.09 |
| TraesCS4B01G304500.1 | Wheat | nucleus | 33.45 | 32.04 |
| TraesCS4D01G302700.1 | Wheat | nucleus | 33.45 | 31.94 |
| GSMUA_Achr6P02150_001 | Banana | nucleus | 37.16 | 31.88 |
| EER96894 | Sorghum | nucleus | 35.81 | 31.36 |
| Os03t0188400-01 | Rice | nucleus | 34.46 | 31.0 |
| Zm00001d020790_P001 | Maize | nucleus | 34.46 | 30.72 |
| AT1G22490.2 | Thale cress | nucleus | 33.45 | 30.37 |
| Zm00001d005939_P001 | Maize | nucleus | 34.12 | 30.33 |
| TraesCS6A01G315700.1 | Wheat | nucleus | 31.42 | 30.29 |
| OQU91887 | Sorghum | nucleus | 33.11 | 30.25 |
| Os10t0376900-01 | Rice | nucleus | 33.45 | 30.18 |
| TraesCS6B01G346100.1 | Wheat | nucleus | 31.76 | 29.47 |
| Os09t0468700-00 | Rice | nucleus | 34.8 | 29.34 |
| Zm00001d027987_P001 | Maize | nucleus | 32.77 | 29.31 |
| Zm00001d018119_P001 | Maize | nucleus | 34.8 | 29.26 |
| TraesCS6D01G294900.1 | Wheat | nucleus | 31.42 | 29.15 |
| TraesCS6A01G335500.1 | Wheat | nucleus | 34.46 | 29.06 |
| Os08t0483900-01 | Rice | nucleus | 35.47 | 28.93 |
| TraesCS5B01G245900.1 | Wheat | nucleus | 33.45 | 28.78 |
| TraesCS5A01G248200.1 | Wheat | nucleus | 33.45 | 28.7 |
| TraesCS6D01G315200.1 | Wheat | nucleus | 33.11 | 28.66 |
| Zm00001d048229_P001 | Maize | nucleus | 34.46 | 28.57 |
| TraesCS5D01G255100.1 | Wheat | nucleus | 32.43 | 28.57 |
| TraesCS6B01G366200.1 | Wheat | nucleus | 33.11 | 28.32 |
| EER95359 | Sorghum | nucleus | 34.12 | 28.29 |
| KXG30709 | Sorghum | nucleus | 33.45 | 28.29 |
| AT5G46690.1 | Thale cress | nucleus | 31.08 | 28.13 |
| Zm00001d052192_P001 | Maize | nucleus | 31.76 | 27.25 |
| AT3G06120.1 | Thale cress | nucleus | 18.58 | 27.23 |
| AT4G01460.2 | Thale cress | nucleus | 28.72 | 26.98 |
| HORVU6Hr1G081120.4 | Barley | nucleus | 31.42 | 26.88 |
| AT3G61950.1 | Thale cress | nucleus | 29.05 | 24.02 |
| HORVU4Hr1G078270.2 | Barley | plastid | 33.45 | 22.4 |
| AT2G46810.1 | Thale cress | nucleus | 27.03 | 21.56 |
| AT5G53210.1 | Thale cress | nucleus | 26.01 | 21.15 |
| HORVU5Hr1G070000.3 | Barley | nucleus, plastid | 33.11 | 20.76 |
| AT3G24140.1 | Thale cress | nucleus | 27.03 | 19.32 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:836657 | ProteinID:AED98039.1 | EMBL:AF488625 | ArrayExpress:AT5G65320 |
| EnsemblPlantsGene:AT5G65320 | RefSeq:AT5G65320 | TAIR:AT5G65320 | RefSeq:AT5G65320-TAIR-G | EnsemblPlants:AT5G65320.1 | TAIR:AT5G65320.1 |
| EMBL:AY070095 | EMBL:AY096704 | Unigene:At.28395 | ProteinID:BAB11554.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_201335.1 | PFAM:PF00010 | PO:PO:0001054 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0020100 | PFscan:PS50888 | PANTHER:PTHR11969 |
| PANTHER:PTHR11969:SF49 | UniProt:Q9FKQ6 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000009EC4C | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BHLH99Transcription factor bHLH99 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ6]
Coordinates
chr5:-:26107169..26108726
Molecular Weight (calculated)
33763.1 Da
IEP (calculated)
9.485
GRAVY (calculated)
-0.502
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFQQDYPHG FSLVETSLSY EMLDYFQNIV VSNSEDVASQ QNSISSSSYS SATLSCSITE QKSHLTEKLS PLRERYGCGD FLSRKRRRRS EKTIVDKENQ
101: RMNHIAVERN RRKQMNHFLS ILKSMMPLSY SQPNDQASII EGTISYLKKL EQRLQSLEAQ LKATKLNQSP NIFSDFFMFP QYSTATATAT ATASSSSSSH
201: HHHKRLEVVA DVEVTMVERH ANIKVLTKTQ PRLLFKIINE FNSLGLSTLH LNLTTSKDMS LFTFSVKVEA DCQLTPSGNE VANTVHEVVR RVHKER
101: RMNHIAVERN RRKQMNHFLS ILKSMMPLSY SQPNDQASII EGTISYLKKL EQRLQSLEAQ LKATKLNQSP NIFSDFFMFP QYSTATATAT ATASSSSSSH
201: HHHKRLEVVA DVEVTMVERH ANIKVLTKTQ PRLLFKIINE FNSLGLSTLH LNLTTSKDMS LFTFSVKVEA DCQLTPSGNE VANTVHEVVR RVHKER
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.