Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040234.1-P | Field mustard | nucleus | 92.57 | 93.03 |
| CDY18843 | Canola | nucleus | 92.57 | 93.03 |
| CDY58338 | Canola | nucleus | 94.55 | 92.27 |
| Bra001183.1-P | Field mustard | nucleus | 94.55 | 92.27 |
| CDY08066 | Canola | nucleus | 94.55 | 92.27 |
| CDY24717 | Canola | nucleus | 89.6 | 90.05 |
| Bra020775.1-P | Field mustard | nucleus | 89.6 | 90.05 |
| CDY05233 | Canola | nucleus | 88.61 | 87.75 |
| VIT_05s0020g02700.t01 | Wine grape | nucleus | 66.83 | 71.05 |
| KRH20902 | Soybean | cytosol | 65.35 | 69.11 |
| KRH11385 | Soybean | cytosol | 64.36 | 68.06 |
| Solyc01g080050.2.1 | Tomato | nucleus | 64.36 | 66.67 |
| GSMUA_Achr7P21110_001 | Banana | nucleus | 61.88 | 65.1 |
| GSMUA_Achr7P21190_001 | Banana | nucleus | 61.88 | 63.13 |
| Zm00001d009778_P001 | Maize | nucleus | 57.92 | 53.42 |
| KXG22733 | Sorghum | nucleus | 57.92 | 49.16 |
| Os05t0597000-00 | Rice | nucleus | 53.96 | 48.02 |
| TraesCS2A01G120700.1 | Wheat | nucleus | 50.99 | 47.69 |
| TraesCS2D01G122800.1 | Wheat | nucleus | 50.49 | 47.44 |
| HORVU2Hr1G020990.1 | Barley | nucleus | 51.49 | 43.7 |
| TraesCS2B01G141600.1 | Wheat | plastid | 50.99 | 43.28 |
| AT5G53210.1 | Thale cress | nucleus | 47.52 | 26.37 |
| AT4G01460.2 | Thale cress | nucleus | 37.13 | 23.81 |
| AT3G24140.1 | Thale cress | nucleus | 42.57 | 20.77 |
| AT2G46810.1 | Thale cress | nucleus | 37.62 | 20.49 |
| AT3G61950.1 | Thale cress | nucleus | 36.14 | 20.39 |
| AT1G72210.1 | Thale cress | nucleus | 30.2 | 19.06 |
| AT5G65320.1 | Thale cress | nucleus | 27.23 | 18.58 |
| AT5G46690.1 | Thale cress | nucleus | 29.7 | 18.35 |
| AT1G22490.2 | Thale cress | nucleus | 27.23 | 16.87 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:819785 | UniProt:A0A178VCY0 | ProteinID:AAF30305.1 | ProteinID:ABI34465.1 |
| ProteinID:AEE74347.1 | EMBL:AF488580 | ArrayExpress:AT3G06120 | EnsemblPlantsGene:AT3G06120 | RefSeq:AT3G06120 | TAIR:AT3G06120 |
| RefSeq:AT3G06120-TAIR-G | EnsemblPlants:AT3G06120.1 | TAIR:AT3G06120.1 | ncoils:Coil | EMBL:DQ446639 | EMBL:DQ653068 |
| EMBL:DQ863645 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009791 | GO:GO:0009913 | GO:GO:0009987 | GO:GO:0010374 | GO:GO:0030154 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | Symbol:MUTE | RefSeq:NP_187263.1 | ProteinID:OAP03215.1 |
| PFAM:PF00010 | PO:PO:0000293 | PO:PO:0000351 | PO:PO:0004011 | PFscan:PS50888 | PANTHER:PTHR45509 |
| UniProt:Q9M8K6 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000009D02D | InterPro:bHLH_dom | : |
Description
MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
Coordinates
chr3:+:1846442..1848259
Molecular Weight (calculated)
22843.9 Da
IEP (calculated)
9.583
GRAVY (calculated)
-0.042
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.