Factsheet for TraesCS2B01G141600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G120700.1	Wheat	nucleus	87.39	96.3
TraesCS2D01G122800.1	Wheat	nucleus	86.97	96.28
HORVU2Hr1G020990.1	Barley	nucleus	86.97	86.97
GSMUA_Achr7P21110_001	Banana	nucleus	54.62	67.71
Zm00001d009778_P001	Maize	nucleus	61.34	66.67
GSMUA_Achr7P21190_001	Banana	nucleus	54.62	65.66
VIT_05s0020g02700.t01	Wine grape	nucleus	51.68	64.74
KXG22733	Sorghum	nucleus	62.6	62.6
Solyc01g080050.2.1	Tomato	nucleus	51.26	62.56
Os05t0597000-00	Rice	nucleus	58.4	61.23
KRH20902	Soybean	cytosol	48.32	60.21
KRH11385	Soybean	cytosol	47.9	59.69
AT3G06120.1	Thale cress	nucleus	43.28	50.99
CDY18843	Canola	nucleus	42.86	50.75
Bra040234.1-P	Field mustard	nucleus	42.86	50.75
CDY58338	Canola	nucleus	43.7	50.24
CDY08066	Canola	nucleus	43.7	50.24
Bra001183.1-P	Field mustard	nucleus	43.7	50.24
CDY05233	Canola	nucleus	42.02	49.02
CDY24717	Canola	nucleus	41.18	48.76
Bra020775.1-P	Field mustard	nucleus	41.18	48.76
TraesCS7B01G232000.1	Wheat	cytosol	39.92	26.1
TraesCS4B01G304500.1	Wheat	nucleus	31.51	24.27
TraesCS4B01G347100.1	Wheat	extracellular	29.83	23.67
TraesCS6B01G346100.1	Wheat	nucleus	31.51	23.51
TraesCS2B01G469800.1	Wheat	nucleus	31.09	22.63
TraesCS2B01G469700.1	Wheat	nucleus	31.09	22.63
TraesCS6B01G291200.1	Wheat	nucleus	31.93	22.62
TraesCS5B01G245900.1	Wheat	nucleus	31.09	21.51
TraesCS1B01G300100.1	Wheat	nucleus	36.97	21.1
TraesCS6B01G366200.1	Wheat	nucleus	30.67	21.1

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791
GO:GO:0009913	GO:GO:0009987	GO:GO:0010374	GO:GO:0030154	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR45509	SMART:SM00353
SUPFAM:SSF47459	EnsemblPlantsGene:TraesCS2B01G141600	EnsemblPlants:TraesCS2B01G141600.1	InterPro:bHLH_dom	TIGR:cd00083	SEG:seg

Description

No Description!

Coordinates

chr2B:+:107963291..107964182

Molecular Weight (calculated)

25648.8 Da

IEP (calculated)

8.498

GRAVY (calculated)

-0.068

Length

238 amino acids

Sequence
(BLAST)

001: MRWSSASSAT RAATVPDRAA EGRRKMSHIA VERNRRRQMN DHLKVLRALT PAFYIKRCDQ ASIIGGAIEF IRELHTVLDA LEAKKKRRLC SPTPSPRSLL
101: TCSTPTSAGG SASDVSPNSN GSSGGSYAIT PVGAAVKELA ACCNSPAADV EARISGANVL LRTLSGRIPG QAARIVALLE SLHLEVLHVN ISTMDDTVLH
201: SFVLKIGLEC QLSVEDVAFE VQQTFCYHQE LDYSSMAI

Best Arabidopsis Sequence Match ( AT3G06120.1 )
(BLAST)

001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN

Arabidopsis Description

MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.