Factsheet for HORVU2Hr1G020990.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G120700.1	Wheat	nucleus	86.55	95.37
TraesCS2D01G122800.1	Wheat	nucleus	85.71	94.88
TraesCS2B01G141600.1	Wheat	plastid	86.97	86.97
GSMUA_Achr7P21110_001	Banana	nucleus	55.04	68.23
GSMUA_Achr7P21190_001	Banana	nucleus	55.04	66.16
Zm00001d009778_P001	Maize	nucleus	60.5	65.75
VIT_05s0020g02700.t01	Wine grape	nucleus	52.1	65.26
Solyc01g080050.2.1	Tomato	nucleus	51.68	63.08
KXG22733	Sorghum	nucleus	61.76	61.76
KRH20902	Soybean	cytosol	48.74	60.73
Os05t0597000-00	Rice	nucleus	57.56	60.35
KRH11385	Soybean	cytosol	48.32	60.21
AT3G06120.1	Thale cress	nucleus	43.7	51.49
CDY18843	Canola	nucleus	42.86	50.75
Bra040234.1-P	Field mustard	nucleus	42.86	50.75
CDY24717	Canola	nucleus	42.02	49.75
Bra020775.1-P	Field mustard	nucleus	42.02	49.75
Bra001183.1-P	Field mustard	nucleus	42.86	49.28
CDY58338	Canola	nucleus	42.86	49.28
CDY08066	Canola	nucleus	42.86	49.28
CDY05233	Canola	nucleus	42.02	49.02
HORVU2Hr1G106030.2	Barley	cytosol, mitochondrion, nucleus	18.49	42.72
HORVU7Hr1G079250.1	Barley	cytosol	41.6	27.12
HORVU4Hr1G084850.2	Barley	extracellular	29.41	23.1
HORVU6Hr1G067000.2	Barley	nucleus	32.35	22.19
HORVU6Hr1G081120.4	Barley	nucleus	30.67	21.1
HORVU1Hr1G071330.3	Barley	nucleus	37.4	20.41
HORVU4Hr1G078270.2	Barley	plastid	30.25	16.29
HORVU5Hr1G070000.3	Barley	nucleus, plastid	31.51	15.89

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A287HAM9	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007275	GO:GO:0008150
GO:GO:0009791	GO:GO:0009913	GO:GO:0009987	GO:GO:0010374	GO:GO:0030154	GO:GO:0046983
InterPro:HLH_DNA-bd_sf	EnsemblPlantsGene:HORVU2Hr1G020990	EnsemblPlants:HORVU2Hr1G020990.1	InterPro:IPR011598	InterPro:IPR036638	PFAM:PF00010
PFscan:PS50888	PANTHER:PTHR45509	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000B47E0CC	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:58721104..58721952

Molecular Weight (calculated)

25922.1 Da

IEP (calculated)

7.758

GRAVY (calculated)

-0.139

Length

238 amino acids

Sequence
(BLAST)

001: RRGLRSIGVE QQRREEEEER RRMSHIAVER NRRRQMNEHL KVLRALTPAF YIKRCDQASI IGGAIEFIRE LHTVLDALEA KKKRRLCSPT PSPRSLLTCS
101: TPTSAGGSAS DVSPNSNGSS GSCVVVAPGV GGAAVKELAA CCNSPAADVE ARISGANVLL RTLSGRVPGQ AATIVALLES LHLEVLHVNI STMDDTVLHS
201: FVLKIGLECQ LSVEEVAFEV QQTFCYHQQE LDYSSMAI

Best Arabidopsis Sequence Match ( AT3G06120.1 )
(BLAST)

001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN

Arabidopsis Description

MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.