Factsheet for Bra001183.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08066	Canola	nucleus	100.0	100.0
CDY58338	Canola	nucleus	100.0	100.0
AT3G06120.1	Thale cress	nucleus	92.27	94.55
Bra040234.1-P	Field mustard	nucleus	91.3	94.03
Bra020775.1-P	Field mustard	nucleus	87.92	90.55
VIT_05s0020g02700.t01	Wine grape	nucleus	62.8	68.42
KRH20902	Soybean	cytosol	61.35	66.49
KRH11385	Soybean	cytosol	60.87	65.97
Solyc01g080050.2.1	Tomato	nucleus	60.39	64.1
GSMUA_Achr7P21110_001	Banana	nucleus	59.42	64.06
GSMUA_Achr7P21190_001	Banana	nucleus	59.42	62.12
Zm00001d009778_P001	Maize	nucleus	57.0	53.88
KXG22733	Sorghum	nucleus	57.0	49.58
TraesCS2A01G120700.1	Wheat	nucleus	50.24	48.15
TraesCS2D01G122800.1	Wheat	nucleus	49.76	47.91
Os05t0597000-00	Rice	nucleus	52.17	47.58
TraesCS2B01G141600.1	Wheat	plastid	50.24	43.7
HORVU2Hr1G020990.1	Barley	nucleus	49.28	42.86
Bra029088.1-P	Field mustard	nucleus	42.03	25.89
Bra040856.1-P	Field mustard	nucleus	27.05	25.81
Bra004505.1-P	Field mustard	nucleus	33.33	25.46
Bra007644.1-P	Field mustard	nucleus	34.3	25.45
Bra022638.1-P	Field mustard	nucleus	42.03	24.86
Bra037414.1-P	Field mustard	nucleus	35.75	23.79
Bra040483.1-P	Field mustard	nucleus	33.82	22.01
Bra003073.1-P	Field mustard	nucleus	45.89	21.94
Bra028357.1-P	Field mustard	nucleus	41.06	21.25
Bra001929.1-P	Field mustard	nucleus	41.06	20.99
Bra028351.1-P	Field mustard	nucleus	35.75	20.56
Bra031865.1-P	Field mustard	nucleus	21.26	20.18
Bra025007.1-P	Field mustard	nucleus	26.57	20.07
Bra027958.1-P	Field mustard	nucleus	27.05	19.18
Bra017533.1-P	Field mustard	nucleus	26.57	19.03
Bra012329.1-P	Field mustard	nucleus	27.05	18.48
Bra016377.1-P	Field mustard	nucleus	26.09	17.88
Bra016080.1-P	Field mustard	nucleus	28.02	17.85
Bra008017.1-P	Field mustard	nucleus	27.54	17.48
Bra003886.1-P	Field mustard	nucleus	27.05	17.28

Protein Annotations

EnsemblPlants:Bra001183.1	EnsemblPlants:Bra001183.1-P	EnsemblPlantsGene:Bra001183	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
ncoils:Coil	PANTHER:PTHR45509	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002540AA8	UniProt:M4CAF4	MapMan:15.5.32	:	:

Description

AT3G06120 (E=3e-098) MUTE | MUTE (MUTE); DNA binding / transcription factor

Coordinates

chrA03:+:15186470..15187614

Molecular Weight (calculated)

23374.6 Da

IEP (calculated)

9.599

GRAVY (calculated)

-0.057

Length

207 amino acids

Sequence
(BLAST)

001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVVEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTLEPS ILAAAATTTN TTTRVPFSRI
101: ENVMTTSTFK EVGACCNSPH ANVEAKISGS NVVLRVVSRR IEGQLVRIIS VLEKLSLQVL HLNISSMEET VLYFFVVKIG LECHLSLEDL TLEVQKSFVP
201: EVIVPTN

Best Arabidopsis Sequence Match ( AT3G06120.1 )
(BLAST)

001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN

Arabidopsis Description

MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.