Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35175 | Canola | nucleus | 94.12 | 92.52 |
| Bra025007.1-P | Field mustard | nucleus | 78.2 | 82.48 |
| AT5G46690.1 | Thale cress | nucleus | 76.82 | 67.89 |
| HORVU2Hr1G106030.2 | Barley | cytosol, mitochondrion, nucleus | 20.07 | 56.31 |
| GSMUA_Achr11P... | Banana | mitochondrion | 30.8 | 47.09 |
| Bra040856.1-P | Field mustard | nucleus | 31.83 | 42.4 |
| Solyc08g076820.2.1 | Tomato | nucleus | 43.94 | 38.72 |
| KRH45428 | Soybean | nucleus | 40.48 | 38.61 |
| KRH75598 | Soybean | nucleus | 40.48 | 38.61 |
| PGSC0003DMT400045210 | Potato | nucleus | 43.94 | 38.48 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 41.87 | 38.41 |
| GSMUA_Achr11P... | Banana | nucleus | 37.72 | 36.33 |
| Bra012329.1-P | Field mustard | nucleus | 34.6 | 33.0 |
| Bra016377.1-P | Field mustard | nucleus | 33.91 | 32.45 |
| TraesCS2A01G448800.1 | Wheat | nucleus | 37.02 | 32.33 |
| TraesCS2B01G469800.1 | Wheat | nucleus | 36.33 | 32.11 |
| TraesCS2B01G469700.1 | Wheat | nucleus | 36.33 | 32.11 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 36.33 | 31.72 |
| Bra027958.1-P | Field mustard | nucleus | 31.83 | 31.51 |
| TraesCS6A01G264200.1 | Wheat | nucleus | 35.99 | 30.95 |
| TraesCS6B01G291200.1 | Wheat | nucleus | 35.99 | 30.95 |
| TraesCS6D01G250700.1 | Wheat | nucleus | 37.02 | 30.84 |
| Zm00001d051509_P001 | Maize | nucleus | 35.29 | 30.72 |
| Bra016080.1-P | Field mustard | nucleus | 34.26 | 30.46 |
| Bra008017.1-P | Field mustard | nucleus | 34.26 | 30.37 |
| Bra003886.1-P | Field mustard | nucleus | 33.56 | 29.94 |
| Zm00001d026046_P001 | Maize | nucleus | 34.26 | 29.46 |
| KXG27015 | Sorghum | cytosol | 34.95 | 29.45 |
| HORVU6Hr1G067000.2 | Barley | nucleus | 35.29 | 29.39 |
| EES07423 | Sorghum | nucleus | 35.29 | 29.23 |
| Bra004505.1-P | Field mustard | nucleus | 27.34 | 29.15 |
| Zm00001d002492_P001 | Maize | mitochondrion | 17.65 | 28.98 |
| Bra031865.1-P | Field mustard | nucleus | 21.8 | 28.9 |
| Bra037414.1-P | Field mustard | nucleus | 30.8 | 28.62 |
| Bra040234.1-P | Field mustard | nucleus | 19.03 | 27.36 |
| Os02t0691500-01 | Rice | nucleus | 35.29 | 27.35 |
| Bra007644.1-P | Field mustard | nucleus | 26.3 | 27.24 |
| Zm00001d017677_P001 | Maize | nucleus | 33.91 | 26.78 |
| Bra001183.1-P | Field mustard | nucleus | 19.03 | 26.57 |
| Bra020775.1-P | Field mustard | nucleus | 18.34 | 26.37 |
| Bra040483.1-P | Field mustard | nucleus | 28.03 | 25.47 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 28.72 | 23.99 |
| Bra028357.1-P | Field mustard | nucleus | 30.8 | 22.25 |
| Bra028351.1-P | Field mustard | nucleus | 27.68 | 22.22 |
| Bra001929.1-P | Field mustard | nucleus | 30.8 | 21.98 |
| Bra029088.1-P | Field mustard | nucleus | 23.88 | 20.54 |
| Bra022638.1-P | Field mustard | nucleus | 23.18 | 19.14 |
| Bra003073.1-P | Field mustard | nucleus | 25.61 | 17.09 |
Protein Annotations
| EnsemblPlants:Bra017533.1 | EnsemblPlants:Bra017533.1-P | EnsemblPlantsGene:Bra017533 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF31 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002542454 | UniProt:M4DM02 | MapMan:15.5.32 | : |
Description
AT5G46690 (E=5e-077) bHLH071 | bHLH071 (beta HLH protein 71); DNA binding / transcription factor
Coordinates
chrA09:-:16143442..16145151
Molecular Weight (calculated)
32214.4 Da
IEP (calculated)
9.874
GRAVY (calculated)
-0.544
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLEALTSNG LLNFVLSETL SPTSENDIID LEPPPENGII VSKNTVPVIS HQEPSSRQLP PARRGKKRKR RKPRVCKNEE EAENQRITHI AVERNRRRQM
101: NQHLSVLRSL MPQPFAQKGD QASIVGGAID FIKELEQQLL SLEAQKLQKA QTNQTGSSST SQDSNGEREN AHQPCSLSLS HFFLHSYDPS QENRVGTTSS
201: VSTAMEDLEV TLIETHANIK ILSRRRGFRW TTVATTGPPQ LSRLMAALQS LSLSVLHLSV TTLDTFAIYS ISTKDTCNGI RARQHIMKA
101: NQHLSVLRSL MPQPFAQKGD QASIVGGAID FIKELEQQLL SLEAQKLQKA QTNQTGSSST SQDSNGEREN AHQPCSLSLS HFFLHSYDPS QENRVGTTSS
201: VSTAMEDLEV TLIETHANIK ILSRRRGFRW TTVATTGPPQ LSRLMAALQS LSLSVLHLSV TTLDTFAIYS ISTKDTCNGI RARQHIMKA
001: MTLEALSSNG LLNFLLSETL SPTPFKSLVD LEPLPENDVI ISKNTISEIS NQEPPPQRQP PATNRGKKRR RRKPRVCKNE EEAENQRMTH IAVERNRRRQ
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVIKLK PYHLNRTKPD
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVIKLK PYHLNRTKPD
Arabidopsis Description
BHLH71Transcription factor bHLH71 [Source:UniProtKB/Swiss-Prot;Acc:Q56XR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.