Factsheet for Os02t0691500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G291200.1	Wheat	nucleus	60.59	67.26
TraesCS6A01G264200.1	Wheat	nucleus	58.98	65.48
TraesCS6D01G250700.1	Wheat	nucleus	60.86	65.42
GSMUA_Achr11P...	Banana	mitochondrion	32.98	65.08
HORVU6Hr1G067000.2	Barley	nucleus	60.05	64.55
EES07423	Sorghum	nucleus	59.52	63.61
Zm00001d051509_P001	Maize	nucleus	54.16	60.84
Zm00001d017677_P001	Maize	nucleus	58.71	59.84
GSMUA_Achr11P...	Banana	nucleus	44.24	55.0
Os02t0759000-01	Rice	cytosol	20.91	51.32
KRH45428	Soybean	nucleus	36.46	44.88
KRH75598	Soybean	nucleus	36.46	44.88
VIT_02s0012g01450.t01	Wine grape	nucleus	37.8	44.76
Solyc08g076820.2.1	Tomato	nucleus	37.53	42.68
PGSC0003DMT400045210	Potato	nucleus	37.53	42.42
Os10t0376900-01	Rice	nucleus	35.12	39.94
CDY03201	Canola	cytosol	19.3	39.78
Os03t0188400-01	Rice	nucleus	34.85	39.51
Os08t0483900-01	Rice	nucleus	37.8	38.84
Os09t0468700-00	Rice	nucleus	35.39	37.61
Bra025007.1-P	Field mustard	nucleus	27.35	37.23
CDY63053	Canola	nucleus	32.17	37.04
CDX77682	Canola	nucleus	32.17	37.04
Os05t0597000-00	Rice	nucleus	22.25	36.56
AT5G46690.1	Thale cress	nucleus	31.9	36.39
Bra017533.1-P	Field mustard	nucleus	27.35	35.29
CDY35175	Canola	nucleus	27.08	34.35
Os03t0122100-00	Rice	mitochondrion, nucleus, plastid	24.93	29.9
Os05t0586300-00	Rice	nucleus	28.15	27.13
Os06t0526100-01	Rice	cytosol, endoplasmic reticulum, nucleus	21.98	20.76
Os02t0257500-00	Rice	nucleus	20.64	18.55

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:9267196	ProteinID:BAD07690.1	ProteinID:BAS80381.1	ncoils:Coil
ProteinID:EAZ24247.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0016020	GO:GO:0016021	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	EnsemblPlantsGene:Os02g0691500	EnsemblPlants:Os02t0691500-01	PFAM:PF00010	PFscan:PS50888
PANTHER:PTHR11969	PANTHER:PTHR11969:SF31	UniProt:Q6ZGS3	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000023679A
RefSeq:XP_015623756.1	InterPro:bHLH_dom	SEG:seg	:	:	:

Description

basic helix-loop-helix protein 049Similar to OSIGBa0142I02-OSIGBa0101B20.1 protein. (Os02t0691500-01)

Coordinates

chr2:+:28390170..28393248

Molecular Weight (calculated)

39565.6 Da

IEP (calculated)

6.283

GRAVY (calculated)

-0.109

Length

373 amino acids

Sequence
(BLAST)

001: MSTLVDALCA PCSDTALIYD TFNASAAASF LFDNAAAFCD ADILGATATG EKEATSSAAA AAAEAAPPRK KRRRRAKSCK SREETETQRM THIAVERNRR
101: RQMNEYLAIL RSLMPEPYVQ RGDQASIVGG AIEFVKELEQ QLQSLEAQKR TLLPHHKARC DDATPMHNAS GSNVGAGGCM EPTTTTSNCS SSVTEDAPSA
201: DAPPFAQFFA YPQYVWCHSP RDSTTTTTAA SASASASASS SSPATVAAAL QSEHRSGLAD IEVSLVETHA SVRVMSPRRP GQLLKMIAGL QALRLTVLHL
301: NVTTLDSLVL YTLSVKVEEG CSLTTVDDIA AAVHHVLCIV DAEAAASEHL LAAGQLATTA TAVAKRELAT YMY

Best Arabidopsis Sequence Match ( AT1G72210.1 )
(BLAST)

001: MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS

Arabidopsis Description

BHLH96Transcription factor bHLH96 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7T4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.