Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 48.68 | 39.78 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 50.0 | 38.19 |
| TraesCS6A01G315700.1 | Wheat | nucleus | 69.08 | 34.2 |
| KXG30709 | Sorghum | nucleus | 78.29 | 34.0 |
| TraesCS6D01G294900.1 | Wheat | nucleus | 69.74 | 33.23 |
| TraesCS6B01G346100.1 | Wheat | nucleus | 69.74 | 33.23 |
| Zm00001d018119_P001 | Maize | nucleus | 75.0 | 32.39 |
| Zm00001d052192_P001 | Maize | nucleus | 71.71 | 31.59 |
| Solyc11g010340.1.1 | Tomato | nucleus | 51.32 | 26.17 |
| Os09t0468700-00 | Rice | nucleus | 56.58 | 24.5 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 51.32 | 24.22 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 44.74 | 23.69 |
| Os08t0483900-01 | Rice | nucleus | 55.26 | 23.14 |
| Os03t0188400-01 | Rice | nucleus | 50.0 | 23.1 |
| Os10t0376900-01 | Rice | nucleus | 47.37 | 21.95 |
| Os05t0597000-00 | Rice | nucleus | 32.24 | 21.59 |
| Os02t0691500-01 | Rice | nucleus | 51.32 | 20.91 |
| CDY33966 | Canola | nucleus | 40.79 | 20.53 |
| AT5G65320.1 | Thale cress | nucleus | 38.16 | 19.59 |
| CDY37820 | Canola | nucleus | 26.32 | 18.35 |
| Bra031865.1-P | Field mustard | nucleus | 25.66 | 17.89 |
| PGSC0003DMT400041644 | Potato | nucleus | 27.63 | 17.72 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 32.89 | 16.08 |
| Os05t0586300-00 | Rice | nucleus | 34.87 | 13.7 |
| Os02t0257500-00 | Rice | nucleus | 26.32 | 9.64 |
| Os06t0526100-01 | Rice | cytosol, endoplasmic reticulum, nucleus | 23.68 | 9.11 |
Protein Annotations
| EnsemblPlants:Os02t0759000-01 | EnsemblPlantsGene:Os02g0759000 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| ncoils:Coil | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF26 | ProteinID:BAF10093.2 | ProteinID:BAS81012.1 | SEG:seg |
| UniParc:UPI0001B6734F | UniProt:Q0DXE5 | MapMan:35.1 | : | : | : |
Description
basic helix-loop-helix protein 048Similar to DNA binding protein. (Os02t0759000-01)
Coordinates
chr2:-:31958975..31959951
Molecular Weight (calculated)
16134.3 Da
IEP (calculated)
5.606
GRAVY (calculated)
-0.020
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: VKELEQLLQS LEAQKRRAEH APPAPPFAGF FTFPQYSTTV GDNNAAGSGA ADGEGGCGAR PGAADIEVAM AESHANVRVL APRRPRQLLR MVVALQCLGL
101: TVLHLNVTTT ADHLALYSFS LKMEDECRLS SVDEIAGAVN QMVTKIAGEC IS
101: TVLHLNVTTT ADHLALYSFS LKMEDECRLS SVDEIAGAVN QMVTKIAGEC IS
001: MPLEAVVYPQ DPFGYLSNCK DFMFHDLYSQ EEFVAQDTKN NIDKLGHEQS FVEQGKEDDH QWRDYHQYPL LIPSLGEELG LTAIDVESHP PPQHRRKRRR
101: TRNCKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP SSYAQRGDQA SIVGGAINYV KELEHILQSM EPKRTRTHDP KGDKTSTSSL VGPFTDFFSF
201: PQYSTKSSSD VPESSSSPAE IEVTVAESHA NIKIMTKKKP RQLLKLITSL QSLRLTLLHL NVTTLHNSIL YSISVRVEEG SQLNTVDDIA TALNQTIRRI
301: QEET
101: TRNCKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP SSYAQRGDQA SIVGGAINYV KELEHILQSM EPKRTRTHDP KGDKTSTSSL VGPFTDFFSF
201: PQYSTKSSSD VPESSSSPAE IEVTVAESHA NIKIMTKKKP RQLLKLITSL QSLRLTLLHL NVTTLHNSIL YSISVRVEEG SQLNTVDDIA TALNQTIRRI
301: QEET
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT1G22490]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.