Factsheet for TraesCS6D01G294900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G315700.1	Wheat	nucleus	91.85	95.44
TraesCS6B01G346100.1	Wheat	nucleus	93.1	93.1
Os02t0759000-01	Rice	cytosol	33.23	69.74
KXG30709	Sorghum	nucleus	65.83	60.0
Zm00001d018119_P001	Maize	nucleus	64.89	58.81
Zm00001d052192_P001	Maize	nucleus	63.32	58.55
GSMUA_Achr3P06660_001	Banana	mitochondrion, nucleus	32.6	55.91
GSMUA_Achr9P15000_001	Banana	mitochondrion	32.92	52.76
Solyc11g010340.1.1	Tomato	nucleus	43.26	46.31
TraesCS4D01G302700.1	Wheat	nucleus	44.2	45.48
GSMUA_Achr5P05450_001	Banana	nucleus	40.44	44.95
PGSC0003DMT400041644	Potato	nucleus	32.92	44.3
VIT_07s0191g00240.t01	Wine grape	nucleus	44.2	43.79
TraesCS2D01G448000.1	Wheat	nucleus	43.57	41.99
TraesCS6D01G315200.1	Wheat	nucleus	44.51	41.52
TraesCS5D01G255100.1	Wheat	nucleus	42.95	40.77
TraesCS6D01G250700.1	Wheat	nucleus	41.07	37.75
CDY37820	Canola	nucleus	24.45	35.78
Bra031865.1-P	Field mustard	nucleus	24.14	35.32
CDY33966	Canola	nucleus	31.66	33.44
TraesCS2D01G122800.1	Wheat	nucleus	22.26	33.02
AT5G65320.1	Thale cress	nucleus	29.15	31.42
TraesCS4D01G342000.1	Wheat	extracellular	29.15	30.69
TraesCS1D01G289400.1	Wheat	nucleus	29.47	22.43
TraesCS7D01G327900.1	Wheat	nucleus	23.2	20.33

Protein Annotations

EnsemblPlants:TraesCS6D01G294900.1	EnsemblPlantsGene:TraesCS6D01G294900	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR11969	PANTHER:PTHR11969:SF24	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	TIGR:cd00083	MapMan:15.5.32	:	:	:

Description

No Description!

Coordinates

chr6D:+:405672718..405674253

Molecular Weight (calculated)

34234.7 Da

IEP (calculated)

9.269

GRAVY (calculated)

-0.297

Length

319 amino acids

Sequence
(BLAST)

001: MALEAVVFPH EHLACSTDKV AAAMSMYAPS LGRGISIVDE FEEKGGVVLQ EEVPGATAWA AAFEGNWEEN HCRPGPVSPP AAVAPTRPAA SGRGKASSSA
101: AARRRRRRPK AVKNREETES QRRNHIAVER NRRRQMNDYL AVLRSAMPPS YAQRGDQASI VAGAINFVKE LEQLLQSLEA QKRRRAQLAS TPPFAGFFTS
201: PQYSTGAGAG AGTADGSGDA ESRRGARRGV ADVEVAVAES HASVKVLAPR RPKQLVRMVV AMQCLGLTVL HLNATATADH LVFYSFSLRM EEECRLSSVD
301: EIAAAVHQMV AEVHAGGPC

Best Arabidopsis Sequence Match ( AT4G01460.2 )
(BLAST)

001: MSGLMSFGEL EDQFGQISDT TMEEKIPFLQ MLQCIEHPFT TTEPNQFLQS LLQIQTLESK SCLTLETNIK RDPGQTDDPE KDPRTENGAV TVKEKRKRKR
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT

Arabidopsis Description

BHLH57Transcription factor bHLH57 [Source:UniProtKB/Swiss-Prot;Acc:Q9M128]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.