Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041644 | Potato | nucleus | 75.5 | 94.94 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 37.58 | 60.22 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 38.93 | 58.29 |
| GSMUA_Achr10P... | Banana | mitochondrion | 36.91 | 55.56 |
| Zm00001d031260_P001 | Maize | nucleus | 38.59 | 53.24 |
| GSMUA_Achr5P17900_001 | Banana | nucleus | 49.66 | 52.48 |
| Os02t0759000-01 | Rice | cytosol | 26.17 | 51.32 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 40.94 | 50.41 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 54.03 | 50.0 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 47.32 | 48.45 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 46.31 | 48.08 |
| GSMUA_Achr8P17650_001 | Banana | nucleus | 47.65 | 47.97 |
| Solyc12g087850.1.1 | Tomato | nucleus | 25.5 | 46.91 |
| GSMUA_Achr10P... | Banana | nucleus | 48.32 | 46.6 |
| TraesCS4B01G304500.1 | Wheat | nucleus | 47.65 | 45.95 |
| TraesCS4D01G302700.1 | Wheat | nucleus | 47.32 | 45.48 |
| TraesCS4A01G404700.1 | Wheat | nucleus | 46.98 | 45.16 |
| TraesCS6A01G315700.1 | Wheat | nucleus | 46.31 | 44.95 |
| Solyc04g074810.2.1 | Tomato | extracellular | 52.68 | 44.23 |
| GSMUA_Achr6P02150_001 | Banana | nucleus | 50.67 | 43.77 |
| TraesCS6D01G294900.1 | Wheat | nucleus | 46.31 | 43.26 |
| Os03t0188400-01 | Rice | nucleus | 47.32 | 42.86 |
| TraesCS6B01G346100.1 | Wheat | nucleus | 45.64 | 42.63 |
| GSMUA_Achr7P12790_001 | Banana | nucleus | 46.64 | 42.51 |
| CDY37820 | Canola | nucleus | 30.87 | 42.2 |
| Os10t0376900-01 | Rice | nucleus | 45.97 | 41.77 |
| Bra031865.1-P | Field mustard | nucleus | 30.2 | 41.28 |
| Zm00001d020790_P001 | Maize | nucleus | 45.97 | 41.27 |
| Os09t0468700-00 | Rice | nucleus | 48.32 | 41.03 |
| TraesCS5D01G255100.1 | Wheat | nucleus | 45.97 | 40.77 |
| Solyc01g098720.2.1 | Tomato | nucleus | 44.63 | 40.55 |
| Zm00001d005939_P001 | Maize | nucleus | 45.3 | 40.54 |
| Zm00001d027987_P001 | Maize | nucleus | 44.97 | 40.48 |
| TraesCS5B01G245900.1 | Wheat | nucleus | 46.64 | 40.41 |
| Solyc08g076820.2.1 | Tomato | nucleus | 44.3 | 40.24 |
| EER96894 | Sorghum | nucleus | 45.64 | 40.24 |
| KXG30709 | Sorghum | nucleus | 46.98 | 40.0 |
| TraesCS5A01G248200.1 | Wheat | nucleus | 46.31 | 40.0 |
| OQU91887 | Sorghum | nucleus | 43.29 | 39.81 |
| AT5G65320.1 | Thale cress | nucleus | 38.93 | 39.19 |
| CDY33966 | Canola | nucleus | 39.6 | 39.07 |
| TraesCS6B01G366200.1 | Wheat | nucleus | 45.3 | 39.02 |
| Solyc01g080050.2.1 | Tomato | nucleus | 25.5 | 38.97 |
| EER95359 | Sorghum | nucleus | 46.64 | 38.94 |
| Zm00001d018119_P001 | Maize | nucleus | 45.97 | 38.92 |
| TraesCS6D01G315200.1 | Wheat | nucleus | 44.63 | 38.89 |
| Solyc09g091760.1.1 | Tomato | nucleus | 32.21 | 38.87 |
| Os08t0483900-01 | Rice | nucleus | 46.98 | 38.57 |
| Zm00001d052192_P001 | Maize | nucleus | 44.63 | 38.55 |
| Zm00001d048229_P001 | Maize | nucleus | 45.97 | 38.38 |
| TraesCS6A01G335500.1 | Wheat | nucleus | 44.97 | 38.18 |
| HORVU6Hr1G081120.4 | Barley | nucleus | 41.61 | 35.84 |
| HORVU4Hr1G078270.2 | Barley | plastid | 45.64 | 30.77 |
| HORVU5Hr1G070000.3 | Barley | nucleus, plastid | 45.64 | 28.81 |
| Solyc05g053660.1.1 | Tomato | nucleus | 33.56 | 26.11 |
| Solyc03g007410.2.1 | Tomato | nucleus | 24.16 | 21.56 |
Protein Annotations
| EnsemblPlants:Solyc11g010340.1.1 | EnsemblPlantsGene:Solyc11g010340.1 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF26 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI00027694F0 | UniProt:K4D5J5 | MapMan:15.5.32 | : | : |
Description
Transcription factor bHLH99 [Source:Projected from Arabidopsis thaliana (AT5G65320) UniProtKB/Swiss-Prot;Acc:Q9FKQ6]
Coordinates
chr11:-:3413585..3415798
Molecular Weight (calculated)
34262.2 Da
IEP (calculated)
6.737
GRAVY (calculated)
-0.610
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MALETVVFQQ DPFNYSHKDC NFYNLETFHD YGNFGYEGYN WNSSIPQSYN DDDNNNNINN NNSNSSPDKY FPVESTVVSG RRKRRRTKCA KNEEEIHNQR
101: MTHIAVERNR RRQMNDYLAV LRSLMPPSYA QRGDQASIVG GAINFVKELE QLLQFLEAHK QVITTNQQHI QYSSFSKFFT FPQYSTGNNN HPLAATTSNE
201: GSEERRSAVA DIEVTMVESH ANVKVLSRRR PKQLLKIVNW LQAMCLTILH LSVTTADHMV LYTFSVKVEE NCELNTVSEI ASAVHEMVAM IKEEAMPC
101: MTHIAVERNR RRQMNDYLAV LRSLMPPSYA QRGDQASIVG GAINFVKELE QLLQFLEAHK QVITTNQQHI QYSSFSKFFT FPQYSTGNNN HPLAATTSNE
201: GSEERRSAVA DIEVTMVESH ANVKVLSRRR PKQLLKIVNW LQAMCLTILH LSVTTADHMV LYTFSVKVEE NCELNTVSEI ASAVHEMVAM IKEEAMPC
001: MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
Arabidopsis Description
BHLH96Transcription factor bHLH96 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.