Factsheet for Solyc09g091760.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076223	Potato	nucleus	95.95	83.16
GSMUA_Achr8P28400_001	Banana	nucleus	46.96	58.29
GSMUA_Achr2P06030_001	Banana	nucleus	59.51	46.08
Solyc01g080050.2.1	Tomato	nucleus	32.79	41.54
Solyc05g053660.1.1	Tomato	nucleus	63.16	40.73
Solyc12g087850.1.1	Tomato	nucleus	25.91	39.51
Os05t0586300-00	Rice	nucleus	55.87	35.66
Zm00001d009715_P001	Maize	nucleus	54.66	32.3
Solyc11g010340.1.1	Tomato	nucleus	38.87	32.21
TraesCS1B01G300100.1	Wheat	nucleus	53.44	31.65
TraesCS1D01G289400.1	Wheat	nucleus	53.44	31.5
TraesCS1A01G290800.1	Wheat	nucleus	53.44	31.43
KXG22636	Sorghum	nucleus	56.28	30.42
HORVU1Hr1G071330.3	Barley	nucleus	52.63	29.82
Solyc08g076820.2.1	Tomato	nucleus	39.27	29.57
Solyc04g074810.2.1	Tomato	extracellular	40.49	28.17
Solyc01g098720.2.1	Tomato	nucleus	35.63	26.83
Solyc03g007410.2.1	Tomato	nucleus	36.03	26.65

Protein Annotations

EnsemblPlants:Solyc09g091760.1.1	EnsemblPlantsGene:Solyc09g091760.1	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR11514
PANTHER:PTHR11514:SF61	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
SUPFAM:SSF55021	UniParc:UPI000276B77F	UniProt:K4CWK2	MapMan:15.5.32	:	:

Description

No Description!

Coordinates

chr9:+:70981101..70982599

Molecular Weight (calculated)

28309.1 Da

IEP (calculated)

7.035

GRAVY (calculated)

-0.476

Length

247 amino acids

Sequence
(BLAST)

001: MVNIDEEKAL MVSQKEEEIN VTFVGENSKG NESKKKRKRT KIRMKSSEEV ENQRMTHIEV ERNRRKQMNE HLHVLRSLMP SSYVQRGDQA SIVGGAIEFV
101: RELEQLLQCL ESQKRRKLYG DNHQDSSLLM EIQNPSNNLV YAPNNNEIGI IQEDIAEIKS CLADVEVKII GIDNAMIKVL SKRRPGQLIN TISALQDLQL
201: NIIHTNVTTI EQTVLYTFNV KICGETRFSA DDIANLVQQI FSFFSCK

Best Arabidopsis Sequence Match ( AT3G24140.1 )
(BLAST)

001: MDKDYSAPNF LGESSGGNDD NSSGMIDYMF NRNLQQQQKQ SMPQQQQHQL SPSGFGATPF DKMNFSDVMQ FADFGSKLAL NQTRNQDDQE TGIDPVYFLK
101: FPVLNDKIED HNQTQHLMPS HQTSQEGGEC GGNIGNVFLE EKEDQDDDND NNSVQLRFIG GEEEDRENKN VTKKEVKSKR KRARTSKTSE EVESQRMTHI
201: AVERNRRKQM NEHLRVLRSL MPGSYVQRGD QASIIGGAIE FVRELEQLLQ CLESQKRRRI LGETGRDMTT TTTSSSSPIT TVANQAQPLI ITGNVTELEG
301: GGGLREETAE NKSCLADVEV KLLGFDAMIK ILSRRRPGQL IKTIAALEDL HLSILHTNIT TMEQTVLYSF NVKITSETRF TAEDIASSIQ QIFSFIHANT
401: NISGSSNLGN IVFT

Arabidopsis Description

FAMAFMA [Source:UniProtKB/TrEMBL;Acc:A0A178VKX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.