Factsheet for Solyc01g080050.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g02700.t01	Wine grape	nucleus	81.03	83.16
GSMUA_Achr7P21110_001	Banana	nucleus	74.36	75.52
KRH20902	Soybean	cytosol	72.31	73.82
GSMUA_Achr7P21190_001	Banana	nucleus	74.36	73.23
KRH11385	Soybean	cytosol	71.28	72.77
AT3G06120.1	Thale cress	nucleus	66.67	64.36
Bra040234.1-P	Field mustard	nucleus	64.1	62.19
CDY18843	Canola	nucleus	64.1	62.19
Bra020775.1-P	Field mustard	nucleus	63.59	61.69
CDY24717	Canola	nucleus	63.59	61.69
Bra001183.1-P	Field mustard	nucleus	64.1	60.39
CDY08066	Canola	nucleus	64.1	60.39
CDY58338	Canola	nucleus	64.1	60.39
CDY05233	Canola	nucleus	63.08	60.29
Zm00001d009778_P001	Maize	nucleus	65.64	58.45
TraesCS2A01G120700.1	Wheat	nucleus	62.56	56.48
TraesCS2D01G122800.1	Wheat	nucleus	62.05	56.28
KXG22733	Sorghum	nucleus	67.69	55.46
Os05t0597000-00	Rice	nucleus	62.56	53.74
HORVU2Hr1G020990.1	Barley	nucleus	63.08	51.68
TraesCS2B01G141600.1	Wheat	plastid	62.56	51.26
Solyc12g087850.1.1	Tomato	nucleus	28.21	33.95
Solyc09g091760.1.1	Tomato	nucleus	41.54	32.79
Solyc03g007410.2.1	Tomato	nucleus	55.9	32.63
Solyc11g010340.1.1	Tomato	nucleus	38.97	25.5
Solyc04g074810.2.1	Tomato	extracellular	40.51	22.25
Solyc05g053660.1.1	Tomato	nucleus	42.56	21.67
Solyc08g076820.2.1	Tomato	nucleus	36.41	21.65
Solyc01g098720.2.1	Tomato	nucleus	34.36	20.43

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791
GO:GO:0009913	GO:GO:0009987	GO:GO:0010374	GO:GO:0030154	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	UniProt:K4AXQ0	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR45509
SMART:SM00353	SUPFAM:SSF47459	EnsemblPlantsGene:Solyc01g080050.2	EnsemblPlants:Solyc01g080050.2.1	UniParc:UPI0002762149	InterPro:bHLH_dom

Description

Transcription factor MUTE [Source:Projected from Arabidopsis thaliana (AT3G06120) UniProtKB/Swiss-Prot;Acc:Q9M8K6]

Coordinates

chr1:+:79172421..79174205

Molecular Weight (calculated)

21872.9 Da

IEP (calculated)

8.847

GRAVY (calculated)

-0.038

Length

195 amino acids

Sequence
(BLAST)

001: MSHIAVERNR RRQMNENLKV LRSLTPCFYI KRGDQASIIA GVIEFIKELH LVLQSLEAKK RRKSLSPSPG PTTPRPLQLS PTPESSPFIT HNNNFKELGA
101: CCNSPVADVE ARICGSNVML RTISKRIPGQ IVKIINVLEK LSFEILHLNI STMQDTVLYS FVIKIGLECQ LSVEELALEV QKSFTSSDVL CINEI

Best Arabidopsis Sequence Match ( AT3G06120.1 )
(BLAST)

001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN

Arabidopsis Description

MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.