Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020775.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY05233 | Canola | nucleus | 96.52 | 95.1 |
| AT3G06120.1 | Thale cress | nucleus | 90.05 | 89.6 |
| CDY18843 | Canola | nucleus | 89.55 | 89.55 |
| CDY58338 | Canola | nucleus | 90.55 | 87.92 |
| CDY08066 | Canola | nucleus | 90.55 | 87.92 |
| VIT_05s0020g02700.t01 | Wine grape | nucleus | 64.68 | 68.42 |
| KRH20902 | Soybean | cytosol | 63.18 | 66.49 |
| KRH11385 | Soybean | cytosol | 62.69 | 65.97 |
| Solyc01g080050.2.1 | Tomato | nucleus | 61.69 | 63.59 |
| GSMUA_Achr7P21110_001 | Banana | nucleus | 60.2 | 63.02 |
| GSMUA_Achr7P21190_001 | Banana | nucleus | 60.2 | 61.11 |
| Zm00001d009778_P001 | Maize | nucleus | 56.22 | 51.6 |
| KXG22733 | Sorghum | nucleus | 56.22 | 47.48 |
| Os05t0597000-00 | Rice | nucleus | 51.24 | 45.37 |
| TraesCS2A01G120700.1 | Wheat | nucleus | 48.76 | 45.37 |
| TraesCS2D01G122800.1 | Wheat | nucleus | 48.26 | 45.12 |
| HORVU2Hr1G020990.1 | Barley | nucleus | 49.75 | 42.02 |
| TraesCS2B01G141600.1 | Wheat | plastid | 48.76 | 41.18 |
| CDY19692 | Canola | nucleus | 49.25 | 28.05 |
| CDY14397 | Canola | nucleus | 49.25 | 27.89 |
| CDY47059 | Canola | nucleus | 47.26 | 27.22 |
| CDY38734 | Canola | nucleus | 47.76 | 27.2 |
| CDY37634 | Canola | nucleus | 29.85 | 26.32 |
| CDY11386 | Canola | nucleus | 35.82 | 25.81 |
| CDX96201 | Canola | nucleus | 42.79 | 24.43 |
| CDY51710 | Canola | nucleus | 36.32 | 23.47 |
| CDX76598 | Canola | nucleus | 36.32 | 23.17 |
| CDY03201 | Canola | cytosol | 20.4 | 22.65 |
| CDY07143 | Canola | nucleus | 34.83 | 22.58 |
| CDX80049 | Canola | nucleus | 33.83 | 21.73 |
| CDY48013 | Canola | nucleus | 34.33 | 21.7 |
| CDX77460 | Canola | nucleus | 38.31 | 21.63 |
| CDX85167 | Canola | nucleus | 41.79 | 21.59 |
| CDY68483 | Canola | nucleus | 34.33 | 21.56 |
| CDY41561 | Canola | nucleus | 33.33 | 21.47 |
| CDY27521 | Canola | nucleus | 32.84 | 21.29 |
| CDY55926 | Canola | nucleus | 33.83 | 21.05 |
| CDX92996 | Canola | nucleus | 41.79 | 20.74 |
| CDY37820 | Canola | nucleus | 22.39 | 20.64 |
| CDX94841 | Canola | nucleus | 41.79 | 20.59 |
| CDY65719 | Canola | nucleus | 29.35 | 19.6 |
| CDY41734 | Canola | nucleus | 29.35 | 19.6 |
| CDY41479 | Canola | nucleus | 27.36 | 19.23 |
| CDX91680 | Canola | nucleus | 27.36 | 19.23 |
| CDY64587 | Canola | nucleus | 35.32 | 19.14 |
| CDY18083 | Canola | nucleus | 36.32 | 19.01 |
| CDY21365 | Canola | nucleus | 28.36 | 18.94 |
| CDY04811 | Canola | nucleus | 28.36 | 18.94 |
| CDY63053 | Canola | nucleus | 30.35 | 18.83 |
| CDY35175 | Canola | nucleus | 27.36 | 18.71 |
| CDX77682 | Canola | nucleus | 29.85 | 18.52 |
| CDY46652 | Canola | nucleus | 25.87 | 18.44 |
| CDX72877 | Canola | nucleus | 29.85 | 18.29 |
| CDY33966 | Canola | nucleus | 27.36 | 18.21 |
| CDX96382 | Canola | nucleus | 29.35 | 18.15 |
| CDY12528 | Canola | nucleus | 25.37 | 18.09 |
| CDY55929 | Canola | nucleus | 29.85 | 17.96 |
| CDY50447 | Canola | nucleus | 28.36 | 17.59 |
| CDX68274 | Canola | nucleus | 28.36 | 17.59 |
| CDX82171 | Canola | nucleus | 27.86 | 17.18 |
| CDY03650 | Canola | nucleus | 27.86 | 17.18 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078GHS9 | UniProt:A0A078GHS9 | EnsemblPlants:CDY24717 | ProteinID:CDY24717 |
| ProteinID:CDY24717.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00027106001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR45509 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002545D90 | InterPro:bHLH_dom | : |
Description
BnaA05g31160DBnaA05g31160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHS9]
Coordinates
chrLK032162:-:606597..607739
Molecular Weight (calculated)
22795.8 Da
IEP (calculated)
8.954
GRAVY (calculated)
-0.111
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKEMQ QLVQVLESKK RRKTLNRPSS PYDHQTVEPS ILAATPNATT RMPFSQIENV
101: MTTSTFKEVG ACSNSHHANV EAKISGSNVV LRVVSWRNEG QLVKIISVLE KLSFQVLHLN ISCMEESVLY FFVVKIGLEC HLSLEELTLE VQKSFVPEAI
201: V
101: MTTSTFKEVG ACSNSHHANV EAKISGSNVV LRVVSWRNEG QLVKIISVLE KLSFQVLHLN ISCMEESVLY FFVVKIGLEC HLSLEELTLE VQKSFVPEAI
201: V
001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN
Arabidopsis Description
MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.