Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55926 | Canola | nucleus | 89.82 | 92.88 |
| CDY68483 | Canola | nucleus | 85.03 | 88.75 |
| CDX76598 | Canola | nucleus | 64.07 | 67.94 |
| CDY11386 | Canola | nucleus | 56.29 | 67.38 |
| AT3G61950.1 | Thale cress | nucleus | 68.26 | 63.69 |
| CDY41561 | Canola | nucleus | 43.11 | 46.15 |
| CDX80049 | Canola | nucleus | 42.81 | 45.69 |
| CDY27521 | Canola | nucleus | 41.92 | 45.16 |
| CDY48013 | Canola | nucleus | 40.72 | 42.77 |
| CDY51710 | Canola | nucleus | 35.33 | 37.94 |
| CDY07143 | Canola | nucleus | 35.03 | 37.74 |
| CDY37634 | Canola | nucleus | 23.35 | 34.21 |
| KRH47774 | Soybean | nucleus | 38.62 | 33.59 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 36.23 | 33.52 |
| KRH06347 | Soybean | nucleus | 38.32 | 32.16 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 29.04 | 32.01 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 29.04 | 32.01 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 29.04 | 32.01 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 28.74 | 32.0 |
| GSMUA_Achr11P... | Banana | nucleus | 27.25 | 31.93 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 27.84 | 31.85 |
| CDY41479 | Canola | nucleus | 26.95 | 31.47 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 28.44 | 30.55 |
| CDX91680 | Canola | nucleus | 25.75 | 30.07 |
| GSMUA_Achr11P... | Banana | nucleus | 29.64 | 30.0 |
| CDY05233 | Canola | nucleus | 18.26 | 29.9 |
| CDY18843 | Canola | nucleus | 17.96 | 29.85 |
| CDY24717 | Canola | nucleus | 17.96 | 29.85 |
| CDY58338 | Canola | nucleus | 18.26 | 29.47 |
| CDY08066 | Canola | nucleus | 18.26 | 29.47 |
| Zm00001d048478_P001 | Maize | nucleus | 28.44 | 29.32 |
| Zm00001d027419_P001 | Maize | nucleus | 26.95 | 28.94 |
| CDY12528 | Canola | nucleus | 24.25 | 28.72 |
| CDY21365 | Canola | nucleus | 25.45 | 28.24 |
| CDY04811 | Canola | nucleus | 25.45 | 28.24 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 30.84 | 28.14 |
| OQU93358 | Sorghum | nucleus | 26.95 | 27.86 |
| CDX68274 | Canola | nucleus | 26.65 | 27.47 |
| CDY50447 | Canola | nucleus | 26.65 | 27.47 |
| CDY46652 | Canola | nucleus | 23.05 | 27.3 |
| CDX96382 | Canola | nucleus | 26.35 | 27.08 |
| CDX72877 | Canola | nucleus | 26.05 | 26.52 |
| CDY37820 | Canola | nucleus | 17.07 | 26.15 |
| CDY65719 | Canola | nucleus | 23.05 | 25.58 |
| CDX82171 | Canola | nucleus | 24.85 | 25.46 |
| CDY41734 | Canola | nucleus | 22.75 | 25.25 |
| CDY03650 | Canola | nucleus | 24.55 | 25.15 |
| CDY33966 | Canola | nucleus | 21.86 | 24.17 |
| CDX77682 | Canola | nucleus | 22.16 | 22.84 |
| CDY63053 | Canola | nucleus | 22.16 | 22.84 |
| CDY35175 | Canola | nucleus | 20.06 | 22.79 |
| CDY03201 | Canola | cytosol | 11.68 | 21.55 |
| CDX77460 | Canola | nucleus | 22.16 | 20.79 |
| CDX85167 | Canola | nucleus | 23.35 | 20.05 |
| CDX92996 | Canola | nucleus | 23.05 | 19.01 |
| CDX94841 | Canola | nucleus | 23.05 | 18.87 |
| CDY19692 | Canola | nucleus | 19.16 | 18.13 |
| CDY47059 | Canola | nucleus | 18.86 | 18.05 |
| CDY14397 | Canola | nucleus | 19.16 | 18.03 |
| CDY38734 | Canola | nucleus | 18.56 | 17.56 |
| CDX96201 | Canola | nucleus | 17.07 | 16.19 |
| CDY18083 | Canola | nucleus | 17.66 | 15.36 |
| CDY64587 | Canola | nucleus | 17.07 | 15.36 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078IZD9 | UniProt:A0A078IZD9 | EnsemblPlants:CDY55929 | ProteinID:CDY55929 |
| ProteinID:CDY55929.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00017529001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 |
| PANTHER:PTHR11969:SF29 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEEDB2 | InterPro:bHLH_dom | SEG:seg |
Description
BnaCnng29570DBnaCnng29570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZD9]
Coordinates
chrLK033440:+:32898..34478
Molecular Weight (calculated)
38912.6 Da
IEP (calculated)
8.591
GRAVY (calculated)
-0.654
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFLFCFFGG SQKERFQGHI NPCFLDRKAD TRSLEVQGFK EAQSFAFKEE EEESMQDTVP FLQMLQSEEP SFLRLLSLQN LKEPWEVESF LSQEGHPHFY
101: QNQVSALYIE GAKQALSSQE ADMILLHSSS PQHKRKNSDL LAPDMTREKR KRRKTKPNKN IEEIENQRIN HIVVERNRRR RMNEHINSLR SLLPPSYIQR
201: TKHPFVGGAI HYAKVLEQII QSLESQKRTQ QSSGVENRVR EDETRVPSIE TTVVQNHVNL KVVCRKRQGE LIRGIISLEK LRLTVLHLNI STLSRFYVSC
301: CFNLKMEDGC ELDSADEIKK VAHQIFDMPM NLNN
101: QNQVSALYIE GAKQALSSQE ADMILLHSSS PQHKRKNSDL LAPDMTREKR KRRKTKPNKN IEEIENQRIN HIVVERNRRR RMNEHINSLR SLLPPSYIQR
201: TKHPFVGGAI HYAKVLEQII QSLESQKRTQ QSSGVENRVR EDETRVPSIE TTVVQNHVNL KVVCRKRQGE LIRGIISLEK LRLTVLHLNI STLSRFYVSC
301: CFNLKMEDGC ELDSADEIKK VAHQIFDMPM NLNN
001: MERFQGHINP CFFDRKPDVR SLEVQGFAEA QSFAFKEKEE ESLQDTVPFL QMLQSEDPSS FFSIKEPNFL TLLSLQTLKE PWELERYLSL EDSQFHSPVQ
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
Arabidopsis Description
BHLH67Transcription factor bHLH67 [Source:UniProtKB/Swiss-Prot;Acc:Q700E4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.