Factsheet for GSMUA_Achr8P12330_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	70.22	77.88
GSMUA_Achr11P...	Banana	nucleus	57.38	73.68
GSMUA_Achr5P20300_001	Banana	nucleus	50.0	62.67
GSMUA_Achr3P06660_001	Banana	mitochondrion, nucleus	23.5	46.24
GSMUA_Achr10P...	Banana	mitochondrion	24.59	45.45
Os03t0122100-00	Rice	mitochondrion, nucleus, plastid	38.52	45.34
GSMUA_Achr9P15000_001	Banana	mitochondrion	24.59	45.23
OQU93358	Sorghum	nucleus	38.8	43.96
Zm00001d027419_P001	Maize	nucleus	37.16	43.73
HORVU4Hr1G084850.2	Barley	extracellular	35.79	43.23
TraesCS4B01G347100.1	Wheat	extracellular	35.25	43.0
TraesCS4D01G342000.1	Wheat	extracellular	35.25	42.57
TraesCS5A01G515800.1	Wheat	extracellular	35.25	42.57
GSMUA_Achr11P...	Banana	mitochondrion	21.86	42.33
Zm00001d048478_P001	Maize	nucleus	37.43	42.28
VIT_15s0048g02510.t01	Wine grape	nucleus	38.8	39.34
GSMUA_Achr2P22310_001	Banana	nucleus	25.96	39.26
Bra004505.1-P	Field mustard	nucleus	28.14	38.01
Bra037414.1-P	Field mustard	nucleus	32.24	37.94
CDY51710	Canola	nucleus	32.24	37.94
GSMUA_Achr7P21110_001	Banana	nucleus	19.67	37.5
CDY07143	Canola	nucleus	31.69	37.42
GSMUA_Achr8P28400_001	Banana	nucleus	20.22	37.19
CDY11386	Canola	nucleus	28.14	36.92
AT4G01460.2	Thale cress	nucleus	31.69	36.83
Bra007644.1-P	Field mustard	nucleus	27.87	36.56
GSMUA_Achr7P21190_001	Banana	nucleus	19.67	36.36
CDY27521	Canola	nucleus	29.78	35.16
KRH47774	Soybean	nucleus	36.89	35.16
GSMUA_Achr5P17900_001	Banana	nucleus	26.78	34.75
GSMUA_Achr6P10290_001	Banana	nucleus	27.32	34.36
CDY41561	Canola	nucleus	29.23	34.29
CDX76598	Canola	nucleus	29.23	33.97
CDX80049	Canola	nucleus	28.96	33.87
KRH06347	Soybean	nucleus	36.61	33.67
CDY48013	Canola	nucleus	29.23	33.65
Bra040483.1-P	Field mustard	nucleus	29.23	33.65
GSMUA_Achr5P05450_001	Banana	nucleus	25.96	33.1
CDY68483	Canola	nucleus	27.87	31.88
CDY55926	Canola	nucleus	27.87	31.58
GSMUA_Achr8P17650_001	Banana	nucleus	25.41	31.42
GSMUA_Achr10P...	Banana	nucleus	26.5	31.39
AT2G46810.1	Thale cress	nucleus	31.69	31.27
CDY55929	Canola	nucleus	28.14	30.84
GSMUA_Achr6P02150_001	Banana	nucleus	28.69	30.43
GSMUA_Achr11P...	Banana	nucleus	24.86	30.33
AT3G61950.1	Thale cress	nucleus	29.51	30.17
GSMUA_Achr7P12790_001	Banana	nucleus	25.96	29.05
GSMUA_Achr2P06030_001	Banana	nucleus	24.59	28.21
GSMUA_Achr5P06780_001	Banana	cytosol	19.4	25.09
GSMUA_Achr10P...	Banana	nucleus	17.76	24.9
GSMUA_Achr8P19870_001	Banana	cytosol, golgi, nucleus	21.04	24.76

Protein Annotations

EnsemblPlants:GSMUA_Achr8P12330_001	EnsemblPlants:GSMUA_Achr8T12330_001	EnsemblPlantsGene:GSMUA_Achr8G12330_001	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
ncoils:Coil	PANTHER:PTHR11969	PANTHER:PTHR11969:SF29	PFAM:PF00010	PFscan:PS50888	SignalP:SignalP-noTM
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000295995A	UniProt:M0TPT6	MapMan:15.5.32	:

Description

Putative Predicted protein (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G12330_001]

Coordinates

chr8:-:9109260..9110633

Molecular Weight (calculated)

41223.1 Da

IEP (calculated)

6.505

GRAVY (calculated)

-0.308

Length

366 amino acids

Sequence
(BLAST)

001: MFFLCCCFSL NILAYPFISP LSLFPKQLVR EEPSAGCLEA GAASATFSEH PEMIYGNLFS HQMPFLQLLH GAMQAGEEEV ELHLQQYQYQ HEGFFTSCTQ
101: ESNFQLLLRL QGQNCFKQLR TAEMDTSRVV EQLESCITHA SESETRGAST SKSVQEVESQ RMTHIAVERN RRRLMNDHLA TLRSLMPSSY VHRGDQASII
201: GGAIDFVKEL EQRLLSLRTQ KRLLESAAVR LRPNDDEPRH TSVLHDGFFI SPQYTGYSRS QQRRRYANGE EAQQEDGTGV DVEATVVQGH VNLKVATRRR
301: RGQLARAIAA MEELRLSVLH LNVASLEPSS ILYSLSLKME EACKLGSADE VATAVHQIFS YINACC

Best Arabidopsis Sequence Match ( AT2G46810.1 )
(BLAST)

001: MFVLRVSNQS FKLHQQVQCK DEIFCLDQKV NVRRSLQVQE TVEDHQSFAL EEEEQQLSTP SLLQDTTIPF LQMLQQSEDP SPFLSFKDPS FLALLSLQTL
101: EKPWELENYL PHEVPEFHSP IHSETNHYYH NPSLEGVNEA ISNQELPFNP LENARSRRKR KNNNLASLMT REKRKRRRTK PTKNIEEIES QRMTHIAVER
201: NRRRQMNVHL NSLRSIIPSS YIQRGDQASI VGGAIDFVKI LEQQLQSLEA QKRSQQSDDN KEQIPEDNSL RNISSNKLRA SNKEEQSSKL KIEATVIESH
301: VNLKIQCTRK QGQLLRSIIL LEKLRFTVLH LNITSPTNTS VSYSFNLKME DECNLGSADE ITAAIRQIFD S

Arabidopsis Description

BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.