Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P06780_001 | Banana | cytosol | 72.41 | 66.78 |
| GSMUA_Achr8P19870_001 | Banana | cytosol, golgi, nucleus | 78.16 | 65.59 |
| GSMUA_Achr7P21110_001 | Banana | nucleus | 37.93 | 51.56 |
| GSMUA_Achr7P21190_001 | Banana | nucleus | 37.93 | 50.0 |
| VIT_16s0050g02500.t01 | Wine grape | nucleus | 60.15 | 46.45 |
| KRH64504 | Soybean | nucleus | 59.39 | 45.06 |
| KRH53438 | Soybean | nucleus | 59.77 | 44.7 |
| Bra029088.1-P | Field mustard | nucleus | 57.47 | 44.64 |
| KRH18131 | Soybean | nucleus | 57.09 | 44.35 |
| KRH16521 | Soybean | nucleus | 55.94 | 44.11 |
| Solyc03g007410.2.1 | Tomato | nucleus | 55.94 | 43.71 |
| CDY47059 | Canola | nucleus | 58.24 | 43.55 |
| CDY38734 | Canola | nucleus | 57.85 | 42.78 |
| PGSC0003DMT400023497 | Potato | nucleus | 57.85 | 42.54 |
| CDX96201 | Canola | nucleus | 57.09 | 42.33 |
| AT5G53210.1 | Thale cress | nucleus | 59.0 | 42.31 |
| Bra022638.1-P | Field mustard | nucleus | 56.32 | 42.0 |
| CDY19692 | Canola | nucleus | 56.7 | 41.93 |
| CDY14397 | Canola | nucleus | 56.7 | 41.69 |
| TraesCS7B01G232000.1 | Wheat | cytosol | 55.17 | 39.56 |
| TraesCS7A01G350900.1 | Wheat | nucleus | 55.17 | 39.56 |
| Zm00001d046096_P001 | Maize | nucleus | 51.34 | 38.73 |
| HORVU7Hr1G079250.1 | Barley | cytosol | 54.02 | 38.63 |
| TraesCS7D01G327900.1 | Wheat | nucleus | 53.64 | 38.46 |
| GSMUA_Achr8P28400_001 | Banana | nucleus | 29.12 | 38.19 |
| Zm00001d053391_P001 | Maize | cytosol, nucleus, plastid | 53.26 | 37.07 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 26.05 | 36.56 |
| EER88428 | Sorghum | nucleus | 52.11 | 35.79 |
| EES06610 | Sorghum | nucleus | 53.64 | 35.18 |
| GSMUA_Achr11P... | Banana | mitochondrion | 25.29 | 34.92 |
| Os06t0526100-01 | Rice | cytosol, endoplasmic reticulum, nucleus | 51.72 | 34.18 |
| Zm00001d016095_P001 | Maize | nucleus | 51.34 | 34.1 |
| Bra003073.1-P | Field mustard | nucleus | 56.32 | 33.95 |
| Os02t0257500-00 | Rice | nucleus | 53.64 | 33.73 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 24.9 | 32.66 |
| GSMUA_Achr10P... | Banana | mitochondrion | 24.52 | 32.32 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 26.82 | 28.93 |
| GSMUA_Achr5P17900_001 | Banana | nucleus | 29.12 | 26.95 |
| GSMUA_Achr2P06030_001 | Banana | nucleus | 32.57 | 26.65 |
| GSMUA_Achr10P... | Banana | nucleus | 29.89 | 25.24 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 27.97 | 25.09 |
| GSMUA_Achr11P... | Banana | nucleus | 28.74 | 25.0 |
| GSMUA_Achr8P17650_001 | Banana | nucleus | 28.35 | 25.0 |
| GSMUA_Achr7P12790_001 | Banana | nucleus | 30.65 | 24.46 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 26.44 | 24.04 |
| GSMUA_Achr11P... | Banana | nucleus | 25.67 | 23.51 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 25.67 | 22.95 |
| GSMUA_Achr6P02150_001 | Banana | nucleus | 29.5 | 22.32 |
| GSMUA_Achr11P... | Banana | nucleus | 24.52 | 19.39 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 24.9 | 17.76 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P01060_001 | EnsemblPlants:GSMUA_Achr10T01060_001 | EnsemblPlantsGene:GSMUA_Achr10G01060_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF58 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000296D8B2 | UniProt:M0RED3 | MapMan:15.5.32 | : |
Description
Putative Transcription factor MUTE [Source:GMGC_GENE;Acc:GSMUA_Achr10G01060_001]
Coordinates
chr10:-:1854039..1855010
Molecular Weight (calculated)
28752.3 Da
IEP (calculated)
6.956
GRAVY (calculated)
-0.446
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESLSELFE HPDASPEDLF SILEAFEDAV SRDMAPFDGR QQRSGHEDDE KAGKALKKRK LSDAPGAQTE QPKTSHITVE RNRRKQMNEH LSVLRSLMPC
101: FYAKRGDQAS IIGGVVEYIK ELQQVLQSLE AKKQRKAYGE VVLSPRPPGS PYMPRMQQNY APPTVPPSHE SSPSFGSSAS ELTANSNSAV AEVEVKFSGP
201: NVILKTVSHR IPGQVLKIVA ALEGLALEIL HVSISTMDDT MLNSFTIKVR TTTTAHQMCF C
101: FYAKRGDQAS IIGGVVEYIK ELQQVLQSLE AKKQRKAYGE VVLSPRPPGS PYMPRMQQNY APPTVPPSHE SSPSFGSSAS ELTANSNSAV AEVEVKFSGP
201: NVILKTVSHR IPGQVLKIVA ALEGLALEIL HVSISTMDDT MLNSFTIKVR TTTTAHQMCF C
001: MQEIIPDFLE ECEFVDTSLA GDDLFAILES LEGAGEISPT AASTPKDGTT SSKELVKDQD YENSSPKRKK QRLETRKEED EEEEDGDGEA EEDNKQDGQQ
101: KMSHVTVERN RRKQMNEHLT VLRSLMPCFY VKRGDQASII GGVVEYISEL QQVLQSLEAK KQRKTYAEVL SPRVVPSPRP SPPVLSPRKP PLSPRINHHQ
201: IHHHLLLPPI SPRTPQPTSP YRAIPPQLPL IPQPPLRSYS SLASCSSLGD PPPYSPASSS SSPSVSSNHE SSVINELVAN SKSALADVEV KFSGANVLLK
301: TVSHKIPGQV MKIIAALEDL ALEILQVNIN TVDETMLNSF TIKVRTNNHP N
101: KMSHVTVERN RRKQMNEHLT VLRSLMPCFY VKRGDQASII GGVVEYISEL QQVLQSLEAK KQRKTYAEVL SPRVVPSPRP SPPVLSPRKP PLSPRINHHQ
201: IHHHLLLPPI SPRTPQPTSP YRAIPPQLPL IPQPPLRSYS SLASCSSLGD PPPYSPASSS SSPSVSSNHE SSVINELVAN SKSALADVEV KFSGANVLLK
301: TVSHKIPGQV MKIIAALEDL ALEILQVNIN TVDETMLNSF TIKVRTNNHP N
Arabidopsis Description
SPCHSPCH [Source:UniProtKB/TrEMBL;Acc:A0A178UF96]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.