Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G106030.2 | Barley | cytosol, mitochondrion, nucleus | 31.75 | 58.25 |
| GSMUA_Achr10P... | Banana | mitochondrion | 59.79 | 57.07 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 52.91 | 53.76 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 55.03 | 52.26 |
| GSMUA_Achr11P... | Banana | nucleus | 75.13 | 47.33 |
| GSMUA_Achr8P28400_001 | Banana | nucleus | 48.15 | 45.73 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 51.32 | 40.08 |
| CDY03201 | Canola | cytosol | 37.57 | 39.23 |
| GSMUA_Achr7P21110_001 | Banana | nucleus | 39.68 | 39.06 |
| GSMUA_Achr7P21190_001 | Banana | nucleus | 39.68 | 37.88 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 62.96 | 37.78 |
| TraesCS6A01G264200.1 | Wheat | nucleus | 64.55 | 36.31 |
| TraesCS6B01G291200.1 | Wheat | nucleus | 64.55 | 36.31 |
| TraesCS2A01G448800.1 | Wheat | nucleus | 63.49 | 36.25 |
| TraesCS2B01G469800.1 | Wheat | nucleus | 61.38 | 35.47 |
| TraesCS2B01G469700.1 | Wheat | nucleus | 61.38 | 35.47 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 61.9 | 35.35 |
| GSMUA_Achr5P17900_001 | Banana | nucleus | 52.38 | 35.11 |
| Solyc08g076820.2.1 | Tomato | nucleus | 60.85 | 35.06 |
| KRH75598 | Soybean | nucleus | 56.08 | 34.98 |
| TraesCS6D01G250700.1 | Wheat | nucleus | 64.02 | 34.87 |
| PGSC0003DMT400045210 | Potato | nucleus | 60.85 | 34.85 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 52.91 | 34.84 |
| KRH45428 | Soybean | nucleus | 55.56 | 34.65 |
| HORVU6Hr1G067000.2 | Barley | nucleus | 63.49 | 34.58 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 51.85 | 33.68 |
| Zm00001d051509_P001 | Maize | nucleus | 58.73 | 33.43 |
| EES07423 | Sorghum | nucleus | 61.38 | 33.24 |
| GSMUA_Achr10P... | Banana | nucleus | 53.97 | 33.01 |
| Os02t0691500-01 | Rice | nucleus | 65.08 | 32.98 |
| Zm00001d002492_P001 | Maize | mitochondrion | 30.69 | 32.95 |
| AT5G46690.1 | Thale cress | nucleus | 55.03 | 31.8 |
| GSMUA_Achr8P17650_001 | Banana | nucleus | 49.74 | 31.76 |
| Bra025007.1-P | Field mustard | nucleus | 45.5 | 31.39 |
| Zm00001d026046_P001 | Maize | nucleus | 55.56 | 31.25 |
| CDY63053 | Canola | nucleus | 53.44 | 31.17 |
| CDX77682 | Canola | nucleus | 53.44 | 31.17 |
| Zm00001d017677_P001 | Maize | nucleus | 60.32 | 31.15 |
| Bra017533.1-P | Field mustard | nucleus | 47.09 | 30.8 |
| KXG27015 | Sorghum | cytosol | 55.56 | 30.61 |
| GSMUA_Achr11P... | Banana | nucleus | 45.5 | 30.18 |
| CDY35175 | Canola | nucleus | 46.56 | 29.93 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 46.03 | 29.79 |
| GSMUA_Achr7P12790_001 | Banana | nucleus | 51.32 | 29.66 |
| GSMUA_Achr6P02150_001 | Banana | nucleus | 52.91 | 28.99 |
| GSMUA_Achr2P06030_001 | Banana | nucleus | 48.15 | 28.53 |
| GSMUA_Achr10P... | Banana | nucleus | 34.92 | 25.29 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 45.5 | 24.86 |
| GSMUA_Achr11P... | Banana | nucleus | 43.39 | 24.85 |
| GSMUA_Achr5P06780_001 | Banana | cytosol | 37.04 | 24.73 |
| GSMUA_Achr8P19870_001 | Banana | cytosol, golgi, nucleus | 38.1 | 23.15 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 42.33 | 21.86 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P23340_001 | EnsemblPlants:GSMUA_Achr11T23340_001 | EnsemblPlantsGene:GSMUA_Achr11G23340_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF31 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002965104 | UniProt:M0RUR4 | MapMan:15.5.32 | : |
Description
Transcription factor bHLH96 [Source:GMGC_GENE;Acc:GSMUA_Achr11G23340_001]
Coordinates
chr11:+:23251818..23253284
Molecular Weight (calculated)
20616.9 Da
IEP (calculated)
6.953
GRAVY (calculated)
-0.097
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHIAVERNR RRQMNEHLAV LRSLMPDSYI QRGDQASIVG GAIDFVKELE QLLQSLEAQK RTLQQRQAGK PESSPATADG GSRSSSSHSH GDQLLPALAD
101: IEVTLIETHA NVRILSPKRP HQLVKIVCGL QDLKLSILHL SLTTLDAMVL YSLSVKVEEG CNLATVDDIA AAIHRMLCLI QAEATAAAQ
101: IEVTLIETHA NVRILSPKRP HQLVKIVCGL QDLKLSILHL SLTTLDAMVL YSLSVKVEEG CNLATVDDIA AAIHRMLCLI QAEATAAAQ
001: MTLEALSSNG LLNFLLSETL SPTPFKSLVD LEPLPENDVI ISKNTISEIS NQEPPPQRQP PATNRGKKRR RRKPRVCKNE EEAENQRMTH IAVERNRRRQ
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
Arabidopsis Description
BHLH71Transcription factor bHLH71 [Source:UniProtKB/Swiss-Prot;Acc:Q56XR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.