Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g076820.2.1 | Tomato | nucleus | 93.33 | 93.9 |
| HORVU2Hr1G106030.2 | Barley | cytosol, mitochondrion, nucleus | 20.0 | 64.08 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 60.3 | 63.17 |
| KRH75598 | Soybean | nucleus | 56.97 | 62.05 |
| GSMUA_Achr11P... | Banana | mitochondrion | 34.85 | 60.85 |
| KRH45428 | Soybean | nucleus | 55.45 | 60.4 |
| Bra025007.1-P | Field mustard | nucleus | 40.3 | 48.54 |
| CDY63053 | Canola | nucleus | 46.67 | 47.53 |
| CDX77682 | Canola | nucleus | 46.67 | 47.53 |
| AT5G46690.1 | Thale cress | nucleus | 46.67 | 47.09 |
| GSMUA_Achr11P... | Banana | nucleus | 42.73 | 47.0 |
| CDY03201 | Canola | cytosol | 25.45 | 46.41 |
| Bra017533.1-P | Field mustard | nucleus | 38.48 | 43.94 |
| TraesCS2A01G448800.1 | Wheat | nucleus | 43.94 | 43.81 |
| CDY35175 | Canola | nucleus | 38.18 | 42.86 |
| TraesCS2B01G469800.1 | Wheat | nucleus | 42.12 | 42.51 |
| TraesCS2B01G469700.1 | Wheat | nucleus | 42.12 | 42.51 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 42.42 | 42.3 |
| PGSC0003DMT400041644 | Potato | nucleus | 30.0 | 41.77 |
| TraesCS6B01G291200.1 | Wheat | nucleus | 42.12 | 41.37 |
| TraesCS6A01G264200.1 | Wheat | nucleus | 42.12 | 41.37 |
| PGSC0003DMT400005446 | Potato | nucleus | 43.03 | 41.16 |
| HORVU6Hr1G067000.2 | Barley | nucleus | 42.73 | 40.63 |
| Zm00001d051509_P001 | Maize | nucleus | 40.61 | 40.36 |
| TraesCS6D01G250700.1 | Wheat | nucleus | 42.42 | 40.35 |
| PGSC0003DMT400045820 | Potato | nucleus | 35.76 | 39.86 |
| EES07423 | Sorghum | nucleus | 42.12 | 39.83 |
| Zm00001d026046_P001 | Maize | nucleus | 40.3 | 39.58 |
| KXG27015 | Sorghum | cytosol | 40.0 | 38.48 |
| Os02t0691500-01 | Rice | nucleus | 42.42 | 37.53 |
| Zm00001d017677_P001 | Maize | nucleus | 41.52 | 37.43 |
| PGSC0003DMT400073574 | Potato | nucleus | 38.18 | 37.39 |
| Zm00001d002492_P001 | Maize | mitochondrion | 18.79 | 35.23 |
| PGSC0003DMT400076223 | Potato | nucleus | 29.7 | 34.39 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 32.73 | 31.21 |
| PGSC0003DMT400040761 | Potato | nucleus | 32.42 | 27.44 |
| PGSC0003DMT400023497 | Potato | nucleus | 23.03 | 21.41 |
Protein Annotations
| EntrezGene:102600604 | MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M1BHA5 |
| PFAM:PF00010 | EnsemblPlantsGene:PGSC0003DMG400017540 | PGSC:PGSC0003DMG400017540 | EnsemblPlants:PGSC0003DMT400045210 | PFscan:PS50888 | PANTHER:PTHR11969 |
| PANTHER:PTHR11969:SF31 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000294BE47 | RefSeq:XP_006352865.1 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BHLH071 [Source:PGSC_GENE;Acc:PGSC0003DMG400017540]
Coordinates
chr8:+:49423751..49426833
Molecular Weight (calculated)
36734.4 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.420
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEALSTNE LLNFIIYDTI STTTNNNNNN LDENALFFDN HEENNAFLLK PQDFCTTTPL EQQYSTAASV PRQDTCREKN NLSVAAQSGG GGGGRKKRRR
101: RPKICKNKEE AENQRMTHIA VERNRRKQMN EHLSVLRSLM PESYVQRGDQ ASIVGGAIEF VKELEHILQS LEAQKFVLLQ QQGGTTSNTG DGCDGYDVGK
201: TEVSSAEYVG TPFAQFFSYP QYTCCELPNK YTSKSKAAIA DIEVTLIETH ANVRILSRRR FRQLSKLVAA FQSLYISVLH LNVTTLDPLV LYSISAKVEE
301: GCQLNSADDI AGAVHHMLRI IEGEAATLSC
101: RPKICKNKEE AENQRMTHIA VERNRRKQMN EHLSVLRSLM PESYVQRGDQ ASIVGGAIEF VKELEHILQS LEAQKFVLLQ QQGGTTSNTG DGCDGYDVGK
201: TEVSSAEYVG TPFAQFFSYP QYTCCELPNK YTSKSKAAIA DIEVTLIETH ANVRILSRRR FRQLSKLVAA FQSLYISVLH LNVTTLDPLV LYSISAKVEE
301: GCQLNSADDI AGAVHHMLRI IEGEAATLSC
001: MTLEALSSNG LLNFLLSETL SPTPFKSLVD LEPLPENDVI ISKNTISEIS NQEPPPQRQP PATNRGKKRR RRKPRVCKNE EEAENQRMTH IAVERNRRRQ
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
Arabidopsis Description
BHLH71Transcription factor bHLH71 [Source:UniProtKB/Swiss-Prot;Acc:Q56XR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.