Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75598 | Soybean | nucleus | 90.76 | 90.76 |
| HORVU2Hr1G106030.2 | Barley | cytosol, mitochondrion, nucleus | 22.11 | 65.05 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 65.68 | 63.17 |
| Solyc08g076820.2.1 | Tomato | nucleus | 60.73 | 56.1 |
| GSMUA_Achr11P... | Banana | mitochondrion | 34.65 | 55.56 |
| PGSC0003DMT400045210 | Potato | nucleus | 60.4 | 55.45 |
| GSMUA_Achr11P... | Banana | nucleus | 46.53 | 47.0 |
| Bra025007.1-P | Field mustard | nucleus | 40.92 | 45.26 |
| CDX77682 | Canola | nucleus | 46.86 | 43.83 |
| CDY63053 | Canola | nucleus | 46.86 | 43.83 |
| AT5G46690.1 | Thale cress | nucleus | 46.2 | 42.81 |
| CDY03201 | Canola | cytosol | 25.08 | 41.99 |
| TraesCS2A01G448800.1 | Wheat | nucleus | 45.54 | 41.69 |
| TraesCS2B01G469800.1 | Wheat | nucleus | 44.88 | 41.59 |
| TraesCS2B01G469700.1 | Wheat | nucleus | 44.88 | 41.59 |
| KRH62289 | Soybean | nucleus | 44.22 | 41.36 |
| TraesCS6B01G291200.1 | Wheat | nucleus | 45.54 | 41.07 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 44.55 | 40.79 |
| TraesCS6A01G264200.1 | Wheat | nucleus | 45.21 | 40.77 |
| Bra017533.1-P | Field mustard | nucleus | 38.61 | 40.48 |
| KRH16792 | Soybean | nucleus | 43.23 | 40.43 |
| TraesCS6D01G250700.1 | Wheat | nucleus | 45.87 | 40.06 |
| KRH53000 | Soybean | nucleus | 43.89 | 39.82 |
| HORVU6Hr1G067000.2 | Barley | nucleus | 45.21 | 39.48 |
| CDY35175 | Canola | nucleus | 37.95 | 39.12 |
| KRG96858 | Soybean | nucleus | 42.57 | 38.86 |
| Zm00001d026046_P001 | Maize | nucleus | 42.9 | 38.69 |
| EES07423 | Sorghum | nucleus | 44.22 | 38.4 |
| KRH68589 | Soybean | nucleus | 42.57 | 37.61 |
| KRH72411 | Soybean | nucleus | 42.9 | 37.57 |
| KRG92821 | Soybean | nucleus | 40.59 | 37.5 |
| Zm00001d051509_P001 | Maize | nucleus | 40.92 | 37.35 |
| KRH33976 | Soybean | nucleus | 40.92 | 37.35 |
| KXG27015 | Sorghum | cytosol | 42.24 | 37.32 |
| KRH11385 | Soybean | cytosol | 23.1 | 36.65 |
| Os02t0691500-01 | Rice | nucleus | 44.88 | 36.46 |
| Zm00001d017677_P001 | Maize | nucleus | 43.89 | 36.34 |
| KRH20902 | Soybean | cytosol | 22.77 | 36.13 |
| Zm00001d002492_P001 | Maize | mitochondrion | 20.46 | 35.23 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 35.31 | 30.92 |
| KRH47774 | Soybean | nucleus | 37.29 | 29.43 |
| KRH06347 | Soybean | nucleus | 36.63 | 27.89 |
| KRH75571 | Soybean | nucleus | 34.98 | 24.71 |
| KRH18131 | Soybean | nucleus | 27.39 | 24.7 |
| KRH16521 | Soybean | nucleus | 26.73 | 24.47 |
| KRH64504 | Soybean | nucleus | 27.39 | 24.13 |
| KRH53438 | Soybean | nucleus | 27.39 | 23.78 |
| KRH71094 | Soybean | nucleus | 33.99 | 23.09 |
Protein Annotations
| EntrezGene:100784115 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02005222 | ncoils:Coil | EnsemblPlantsGene:GLYMA_08G271000 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1KX21 |
| InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH45428 | ProteinID:KRH45428 | ProteinID:KRH45428.1 | ProteinID:KRH45429.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF31 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0002338405 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:35284023..35286868
Molecular Weight (calculated)
34401.9 Da
IEP (calculated)
7.918
GRAVY (calculated)
-0.445
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLETLQSNE FSNFIIYDTI SATPFSSHGS PEASFLESFV NYQEQHDHPT FDNCAMRTRK REASEPESIG RRQNSVAVQG RKKRRRKPRV CKNTEEAETQ
101: RITHITVERN RRKQMNEHLA VLRSLMPESY VQRGDQASIV GGAIEFVKEL EHLLQSLEAR KLQLLHQEVA QTNENTAISK LMQPPFAHCF SYPQYTWSQT
201: PNKYTSKTKA AIADIEVTLI ETHANLRILT RRSSHGQLTK LVAGFQTLCL TVLHLNVTTI DPLVFYSFSA KVEEGFQLGS VDGIATAVHH LLARIEEEAS
301: LCC
101: RITHITVERN RRKQMNEHLA VLRSLMPESY VQRGDQASIV GGAIEFVKEL EHLLQSLEAR KLQLLHQEVA QTNENTAISK LMQPPFAHCF SYPQYTWSQT
201: PNKYTSKTKA AIADIEVTLI ETHANLRILT RRSSHGQLTK LVAGFQTLCL TVLHLNVTTI DPLVFYSFSA KVEEGFQLGS VDGIATAVHH LLARIEEEAS
301: LCC
001: MTLEALSSNG LLNFLLSETL SPTPFKSLVD LEPLPENDVI ISKNTISEIS NQEPPPQRQP PATNRGKKRR RRKPRVCKNE EEAENQRMTH IAVERNRRRQ
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
Arabidopsis Description
BHLH71Transcription factor bHLH71 [Source:UniProtKB/Swiss-Prot;Acc:Q56XR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.